RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SGF29Q96ES7 293 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 TMEM209Q96SK2 561 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 SLC39A10Q9ULF5 831 aa20.59■□□□□ 0.89
SNX3-201ENST00000230085 STX16-NPEPL1H3BU86 382 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 H7C4K7 107 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 EEF2KO00418 725 aaKnown RBP20.58■□□□□ 0.89
SNX3-201ENST00000230085 PDGFRBP09619 1106 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 POU3F3P20264 500 aaPredicted RBP20.58■□□□□ 0.89
SNX3-201ENST00000230085 WARSP23381 471 aaKnown RBP20.58■□□□□ 0.89
SNX3-201ENST00000230085 MYF6P23409 242 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 CD68P34810 354 aaPredicted RBP20.58■□□□□ 0.89
SNX3-201ENST00000230085 OR1D2P34982 312 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 GNL1P36915 607 aaPredicted RBP20.58■□□□□ 0.89
SNX3-201ENST00000230085 LHX1P48742 406 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 RAB10P61026 200 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 PDAP1Q13442 181 aaKnown RBP20.58■□□□□ 0.89
SNX3-201ENST00000230085 TSTD2Q5T7W7 516 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 THEM5Q8N1Q8 247 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 CCNYQ8ND76 341 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 HMGCLL1Q8TB92 370 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 ROPN1LQ96C74 230 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 PGAP3Q96FM1 320 aaPredicted RBP20.58■□□□□ 0.89
SNX3-201ENST00000230085 TSGA13Q96PP4 275 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 KLHL5Q96PQ7 755 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 SLC25A23Q9BV35 468 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNX3-201ENST00000230085 FNIP2Q9P278 1114 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 BACE2Q9Y5Z0 518 aa20.58■□□□□ 0.89
SNX3-201ENST00000230085 E7ENX8 843 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 JUNP05412 331 aaKnown RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 OR4Q2P0C623 313 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 ATP5F1P24539 256 aaPredicted RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 ARPP19P56211 112 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 C6orf10Q5SRN2 563 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 ERMP1Q7Z2K6 904 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 LZTR1Q8N653 840 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 DNAAF3Q8N9W5 541 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 ACVR1CQ8NER5 493 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 SPPL2BQ8TCT7 592 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 NPAS2Q99743 824 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 RHOBTB2Q9BYZ6 727 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 IARS2Q9NSE4 1012 aaKnown RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 AQP12BA6NM10 295 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 BBIP1A8MTZ0 92 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 USP10Q14694 798 aaKnown RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 TCEAL5Q5H9L2 206 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 SLC8B1Q6J4K2 584 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 KRT80Q6KB66 452 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 PAOXQ6QHF9 649 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 GPR180Q86V85 440 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 AQP12AQ8IXF9 295 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 SMYD1Q8NB12 490 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 LPGAT1Q92604 370 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 TMA16Q96EY4 203 aaKnown RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 TEKT5Q96M29 485 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 PPP1R2P1Q96PQ5 205 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 CYP2S1Q96SQ9 504 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 HNRNPABQ99729 332 aaKnown RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 TMEM79Q9BSE2 394 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 EMILIN2Q9BXX0 1053 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 NSUN3Q9H649 340 aaKnown RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 CD320Q9NPF0 282 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 RRN3Q9NYV6 651 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 SEPT10Q9P0V9 454 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 XPR1Q9UBH6 696 aa20.57■□□□□ 0.88
SNX3-201ENST00000230085 RUVBL2Q9Y230 463 aaKnown RBP20.57■□□□□ 0.88
SNX3-201ENST00000230085 FBP2O00757 339 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 CBFA2T3O75081 653 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 LCP1P13796 627 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 ADRA1BP35368 520 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 NRIP1P48552 1158 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 ESRRGP62508 458 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 REP15Q6BDI9 236 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 HMBOX1Q6NT76 420 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 ZSCAN18Q8TBC5 510 aaPredicted RBP20.56■□□□□ 0.88
SNX3-201ENST00000230085 LRTOMTQ8WZ04 291 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 VPS50Q96JG6 964 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 SLC45A3Q96JT2 553 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 TCF12Q99081 682 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 ACBD6Q9BR61 282 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 TRMOQ9BU70 441 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 YTHDF1Q9BYJ9 559 aaKnown RBP20.56■□□□□ 0.88
SNX3-201ENST00000230085 DPEP3Q9H4B8 488 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 PALMDQ9NP74 551 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 CCM2LQ9NUG4 571 aaPredicted RBP20.56■□□□□ 0.88
SNX3-201ENST00000230085 ADA2Q9NZK5 511 aa20.56■□□□□ 0.88
SNX3-201ENST00000230085 MYOCOSA0A1B0GUC4 107 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 E2F8A0AVK6 867 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 KCNU1A8MYU2 1149 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 ZBTB24O43167 697 aaPredicted RBP20.55■□□□□ 0.88
SNX3-201ENST00000230085 SNRPB2P08579 225 aaKnown RBP20.55■□□□□ 0.88
SNX3-201ENST00000230085 IDO1P14902 403 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 ERCC2P18074 760 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 CD97P48960 835 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 NDUFV1P49821 464 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 GALK1P51570 392 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 NDST2P52849 883 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 NME5P56597 212 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 ILF2Q12905 390 aaKnown RBP20.55■□□□□ 0.88
SNX3-201ENST00000230085 PCID2Q5JVF3 399 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms