RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 EMCNQ9ULC0 261 aa10.69□□□□□ -0.7
CDCA3-201ENST00000229265 RUVBL2Q9Y230 463 aaKnown RBP10.69□□□□□ -0.7
CDCA3-201ENST00000229265 VWA7Q9Y334 891 aa10.69□□□□□ -0.7
CDCA3-201ENST00000229265 OR51B4Q9Y5P0 310 aa10.69□□□□□ -0.7
CDCA3-201ENST00000229265 LAMA1P25391 3075 aa10.69□□□□□ -0.7
CDCA3-201ENST00000229265 HEPACAM2A8MVW5 462 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ANKRD66B4E2M5 251 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 TARM1B6A8C7 271 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ECI2O75521 394 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 RPP40O75818 363 aaKnown RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ZMPSTE24O75844 475 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 UBOX5O94941 541 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 LUC7L3O95232 432 aaKnown RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 CYBBP04839 570 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 FGF3P11487 239 aaPredicted RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 TDGF1P13385 188 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ARNTP27540 789 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 GABRB3P28472 473 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 GABRR2P28476 465 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 LIG3P49916 1009 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ADARP55265 1226 aaKnown RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ABCE1P61221 599 aaKnown RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 AP1S1P61966 158 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 IRX1P78414 480 aaPredicted RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 DSC2Q02487 901 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 DMC1Q14565 340 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 MLF2Q15773 248 aaPredicted RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 RNF219Q5W0B1 726 aaPredicted RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 TRIM68Q6AZZ1 485 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 CXorf57Q6NSI4 855 aaKnown RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 KLC3Q6P597 504 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 RFWD3Q6PCD5 774 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ZYG11AQ6WRX3 759 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 Q6ZS52 159 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 TPRG1Q6ZUI0 275 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 RAPH1Q70E73 1250 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 SLC22A9Q8IVM8 553 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 C10orf67Q8IYJ2 551 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 TMEM151AQ8N4L1 468 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 DCAF4L2Q8NA75 395 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 OR13J1Q8NGT2 312 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 OR4L1Q8NH43 312 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 KLHL29Q96CT2 875 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ALG14Q96F25 216 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 NSL1Q96IY1 281 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 CNDP1Q96KN2 507 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 CYP2S1Q96SQ9 504 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 SPON2Q9BUD6 331 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ILKAPQ9H0C8 392 aaPredicted RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 MYLK2Q9H1R3 596 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 C1orf21Q9H246 121 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 MAGEE1Q9HCI5 957 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 SCUBE2Q9NQ36 999 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ABCF3Q9NUQ8 709 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 PIH1D1Q9NWS0 290 aaKnown RBP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDCA3-201ENST00000229265 TBC1D14Q9P2M4 693 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 HEY2Q9UBP5 337 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 SLC39A10Q9ULF5 831 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 ARHGAP26Q9UNA1 814 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 CHKBQ9Y259 395 aa10.68□□□□□ -0.7
CDCA3-201ENST00000229265 A0A0D9SEW6 157 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 FAM95CA0A1B0GW59 222 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 C2orf78A6NCI8 922 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 GOLGA8CPA6NN73 597 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 F5H423 210 aaPredicted RBP10.67□□□□□ -0.7
CDCA3-201ENST00000229265 G3V2L1 256 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 ZNF197O14709 1029 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 MGRN1O60291 552 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 NPHS1O60500 1241 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 HAUS5O94927 633 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 S1PR4O95977 384 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 SERPINA6P08185 405 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 MYL2P10916 166 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 ARSAP15289 507 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 LPOP22079 712 aaPredicted RBP10.67□□□□□ -0.7
CDCA3-201ENST00000229265 CALB2P22676 271 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 PTPN4P29074 926 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 GDI1P31150 447 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 RPS24P62847 133 aaKnown RBP10.67□□□□□ -0.7
CDCA3-201ENST00000229265 SULT2A1Q06520 285 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 OLIG2Q13516 323 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 PCLAFQ15004 111 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 GAB4Q2WGN9 574 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 ARHGAP15Q53QZ3 475 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 AARS2Q5JTZ9 985 aaKnown RBP10.67□□□□□ -0.7
CDCA3-201ENST00000229265 GPR158Q5T848 1215 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 LYPLAL1Q5VWZ2 237 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 LIPMQ5VYY2 423 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 TXNDC8Q6A555 127 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 NCEH1Q6PIU2 408 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 CERS6Q6ZMG9 384 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 CLNKQ7Z7G1 428 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 TBC1D1Q86TI0 1168 aaPredicted RBP10.67□□□□□ -0.7
CDCA3-201ENST00000229265 ARID3BQ8IVW6 561 aaPredicted RBP10.67□□□□□ -0.7
CDCA3-201ENST00000229265 CFAP52Q8N1V2 620 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 SMARCD2Q92925 531 aa10.67□□□□□ -0.7
CDCA3-201ENST00000229265 HDAC10Q969S8 669 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms