RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 HGSO14964 777 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 ITM2AO43736 263 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 TMCC1O94876 653 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 S1PR4O95977 384 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 PENKP01210 267 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 ASGR2P07307 311 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 RBP1P09455 135 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 HNRNPH1P31943 449 aaKnown RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 SCNN1BP51168 640 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 ZNF140P52738 457 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 DNAJB13P59910 316 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 AP1S1P61966 158 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 KCNJ2P63252 427 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 CDH18Q13634 790 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 GALNT3Q14435 633 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 CNSTQ6PJW8 725 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 AFTPHQ6ULP2 937 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 PIWIL4Q7Z3Z4 852 aaKnown RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 SDCCAG8Q86SQ7 713 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 DTWD2Q8NBA8 298 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 OR4L1Q8NH43 312 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 KCTD4Q8WVF5 259 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 PTCD3Q96EY7 689 aaKnown RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 UBXN10Q96LJ8 280 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 TCF25Q9BQ70 676 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 FEM1AQ9BSK4 669 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 FBXO6Q9NRD1 293 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 RUVBL2Q9Y230 463 aaKnown RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-201ENST00000229251 VWA7Q9Y334 891 aa13.13□□□□□ -0.31
COPS7A-201ENST00000229251 CCDC189A1A4V9 331 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 PFDN6O15212 129 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 NPHS1O60500 1241 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 TSPAN3O60637 253 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 WISP3O95389 354 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 CBX6O95503 412 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 HSPA4LO95757 839 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 CKMP06732 381 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 C8AP07357 584 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 SBK3P0C264 359 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 GLDCP23378 1020 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 DDX6P26196 483 aaKnown RBP eCLIP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 RGRP47804 291 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 CSNK1DP48730 415 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 SUOXP51687 545 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 ARSDP51689 593 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 STC1P52823 247 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 RPL26P61254 145 aaKnown RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 PRKAA1Q13131 559 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 RCN2Q14257 317 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 ACAP2Q15057 778 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 SNCBQ16143 134 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 HSF5Q4G112 596 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 HECTD2Q5U5R9 776 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 METTL21CQ5VZV1 264 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 TXNDC8Q6A555 127 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 RETSATQ6NUM9 610 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 PTAR1Q7Z6K3 402 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 CARNMT1Q8N4J0 409 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 WBP2Q969T9 261 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 TBATAQ96M53 351 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 SLC22A12Q96S37 553 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 GATA5Q9BWX5 397 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 ILKAPQ9H0C8 392 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 CDH19Q9H159 772 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 XPR1Q9UBH6 696 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 MARCOQ9UEW3 520 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-201ENST00000229251 VPS28Q9UK41 221 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 SH3BP1Q9Y3L3 701 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 RAP2CQ9Y3L5 183 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 FANCMQ8IYD8 2048 aa13.12□□□□□ -0.31
COPS7A-201ENST00000229251 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-201ENST00000229251 TTC24A2A3L6 582 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-201ENST00000229251 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-201ENST00000229251 ANKRD66B4E2M5 251 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 H7C0S8 307 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 LYPLA1O75608 230 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-201ENST00000229251 WFS1O76024 890 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 CD160O95971 181 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 GLUD1P00367 558 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 GOT2P00505 430 aaKnown RBP13.11□□□□□ -0.31
COPS7A-201ENST00000229251 PRLP01236 227 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 KRT16P08779 473 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 KITP10721 976 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 SAT1P21673 171 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 ATP5F1P24539 256 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-201ENST00000229251 EPHA5P54756 1037 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 TECRLQ5HYJ1 363 aa13.11□□□□□ -0.31
COPS7A-201ENST00000229251 RBM20Q5T481 1227 aaKnown RBP13.11□□□□□ -0.31
COPS7A-201ENST00000229251 NCEH1Q6PIU2 408 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms