RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 A6NHS1 94 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 SEC24AO95486 1093 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 PIGRP01833 764 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 CDH3P22223 829 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 TNK2Q07912 1038 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 DDX53Q86TM3 631 aaKnown RBP13.74□□□□□ -0.21
NFKB1-201ENST00000226574 CACUL1Q86Y37 369 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
NFKB1-201ENST00000226574 RDH11Q8TC12 318 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 PSMG2Q969U7 264 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 SLC39A8Q9C0K1 460 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 KCNK13Q9HB14 408 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 HMG20AQ9NP66 347 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 CNTN6Q9UQ52 1028 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 PRR23AA6NEV1 266 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 TSC22D2O75157 780 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 KRT6AP02538 564 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 KRT6BP04259 564 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 GSTM1P09488 218 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 KRT6CP48668 564 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 CEACAM7Q14002 265 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 FSCN1Q16658 493 aaKnown RBP13.74□□□□□ -0.21
NFKB1-201ENST00000226574 TTC23Q5W5X9 447 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 LINGO4Q6UY18 593 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 ASB8Q9H765 288 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 TXNRD2Q9NNW7 524 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 CACNA2D2Q9NY47 1150 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 ADGRE2Q9UHX3 823 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 KCTD3Q9Y597 815 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 MYO7AQ13402 2215 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 A0A1W2PPW3 197 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 A0A1W2PQH9 124 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 RAD51BO15315 384 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 ULK1O75385 1050 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 ETV4P43268 484 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 ST13P50502 369 aaKnown RBP13.74□□□□□ -0.21
NFKB1-201ENST00000226574 SLC16A1P53985 500 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 CSTF3Q12996 717 aaKnown RBP13.74□□□□□ -0.21
NFKB1-201ENST00000226574 STARD3Q14849 445 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 RABL3Q5HYI8 236 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 FAM45BPQ6NSW5 357 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 KCTD8Q6ZWB6 473 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 ZC3HC1Q86WB0 502 aaKnown RBP13.74□□□□□ -0.21
NFKB1-201ENST00000226574 FAM45AQ8TCE6 357 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 HPS1Q92902 700 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 TMEM74Q96NL1 305 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 KCNA7Q96RP8 456 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 TPK1Q9H3S4 243 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 FAM105AQ9NUU6 356 aa13.74□□□□□ -0.21
NFKB1-201ENST00000226574 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 SNAP91O60641 907 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 USP2O75604 605 aaPredicted RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 OR4F21O95013 312 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 GRK4P32298 578 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 EPHX2P34913 555 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 RPS9P46781 194 aaKnown RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 ENTPD1P49961 510 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 DAOAP59103 153 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 TPGS1Q6ZTW0 290 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 RSPH1Q8WYR4 309 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 TSEN34Q9BSV6 310 aaKnown RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 ZYG11BQ9C0D3 744 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 TCAF1Q9Y4C2 921 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 PCDHB5Q9Y5E4 795 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 RNASEH2AO75792 299 aaKnown RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 AARS2Q5JTZ9 985 aaKnown RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 CRTC3Q6UUV7 619 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 DENND1CQ8IV53 801 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 OR2T12Q8NG77 320 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 OR13C4Q8NGS5 318 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 SH3GL1Q99961 368 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 RMND5AQ9H871 391 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 CAPN10Q9HC96 672 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 TLR8Q9NR97 1041 aaKnown RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 PNMA8CA0A1B0GUJ8 204 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 ALDH9A1P49189 494 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 EPGNQ6UW88 154 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 PAGE2Q7Z2X7 111 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 FEM1AQ9BSK4 669 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 CHID1Q9BWS9 393 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
NFKB1-201ENST00000226574 GMPPBQ9Y5P6 360 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 PTGDR2Q9Y5Y4 395 aa13.73□□□□□ -0.21
NFKB1-201ENST00000226574 ARHGEF9O43307 516 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 RECQL5O94762 991 aaPredicted RBP13.72□□□□□ -0.21
NFKB1-201ENST00000226574 MTHFRP42898 656 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 RFX3P48380 749 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 MTTPP55157 894 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ZCCHC8Q6NZY4 707 aaKnown RBP13.72□□□□□ -0.21
NFKB1-201ENST00000226574 FAM151BQ6UXP7 276 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 FBXL20Q96IG2 436 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 GLT1D1Q96MS3 346 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 OR52E6Q96RD3 313 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 SMPD3Q9NY59 655 aaPredicted RBP13.72□□□□□ -0.21
NFKB1-201ENST00000226574 CDH9Q9ULB4 789 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 SH3BP1Q9Y3L3 701 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 MATN2O00339 956 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 NBNO60934 754 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms