RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 XIAPP98170 497 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 MYBPC1Q00872 1141 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 ROR2Q01974 943 aaKnown RBP14.62□□□□□ -0.07
CNOT3-201ENST00000221232 SERINC3Q13530 473 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 MAP7D1Q3KQU3 841 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 RNF19BQ6ZMZ0 732 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 CHSY3Q70JA7 882 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 RETREG3Q86VR2 466 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 TMEM102Q8N9M5 508 aaPredicted RBP14.62□□□□□ -0.07
CNOT3-201ENST00000221232 GRIN3AQ8TCU5 1115 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 UROC1Q96N76 676 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 BTBD9Q96Q07 612 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 SLC29A1Q99808 456 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 NACA2Q9H009 215 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 UNC93B1Q9H1C4 597 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 SARS2Q9NP81 518 aaKnown RBP14.62□□□□□ -0.07
CNOT3-201ENST00000221232 IKZF3Q9UKT9 509 aa14.62□□□□□ -0.07
CNOT3-201ENST00000221232 FAM149AA5PLN7 773 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 GPR39O43194 453 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 SPATA31D3P0C874 917 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 APLP1P51693 650 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 STX1BP61266 288 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 MBTPS1Q14703 1052 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 RPS6KA2Q15349 733 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 RBM44Q6ZP01 1051 aaKnown RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 SPATA31D4Q6ZUB0 917 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 LARP4Q71RC2 724 aaKnown RBP eCLIP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 SLC22A9Q8IVM8 553 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 CCDC117Q8IWD4 279 aaPredicted RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 COLGALT2Q8IYK4 626 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 OR4L1Q8NH43 312 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 GABPB2Q8TAK5 448 aaPredicted RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 POLR1EQ9GZS1 481 aaKnown RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 SPAG4Q9NPE6 437 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.61□□□□□ -0.076e-8■■■□□ 16.6
CNOT3-201ENST00000221232 POLR3BQ9NW08 1133 aaPredicted RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 UTP6Q9NYH9 597 aaKnown RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 SPO11Q9Y5K1 396 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 A0A0J9YYE9 177 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 KIF3CO14782 793 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 SLC22A2O15244 555 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 CRCPO75575 148 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 OAZ2O95190 189 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 SMIM18P0DKX4 95 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 PRDX3P30048 256 aaKnown RBP14.61□□□□□ -0.07
CNOT3-201ENST00000221232 HTR7P34969 479 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 AGTR2P50052 363 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 IRF5Q13568 498 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 LRRC49Q8IUZ0 686 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 EFHBQ8N7U6 833 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 OR4K2Q8NGD2 314 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 LINC01599Q8WXQ3 324 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 BHMTQ93088 406 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 ASB9Q96DX5 294 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 PPP1R2P1Q96PQ5 205 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 ZBED2Q9BTP6 218 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 Q9H521 79 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 CATSPERZQ9NTU4 200 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 VPS28Q9UK41 221 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 PCDHGC4Q9Y5F7 938 aa14.61□□□□□ -0.07
CNOT3-201ENST00000221232 LOC285095A0A1B0GVY8 99 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 WASH4PA8MWX3 477 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 CDC7O00311 574 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 TLR5O60602 858 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 SRP72O76094 671 aaKnown RBP14.6□□□□□ -0.07
CNOT3-201ENST00000221232 CKBP12277 381 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 HERVK_113P63132 956 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 NFE2Q16621 373 aaPredicted RBP14.6□□□□□ -0.07
CNOT3-201ENST00000221232 SLC5A9Q2M3M2 681 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 FUT11Q495W5 492 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 FAM45BPQ6NSW5 357 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 C16orf59Q7L2K0 433 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 FAM45AQ8TCE6 357 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 TWIST2Q8WVJ9 160 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 SLCO4A1Q96BD0 722 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 FAR2Q96K12 515 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 ERVK-6Q9BXR3 956 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 GOLGA8CPA6NN73 597 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 AKAP10O43572 662 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 IGHA2P01877 340 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 TFAP2AP05549 437 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 HSPA1AP0DMV8 641 aaKnown RBP14.6□□□□□ -0.07
CNOT3-201ENST00000221232 HSPA1BP0DMV9 641 aaKnown RBP14.6□□□□□ -0.07
CNOT3-201ENST00000221232 HGFP14210 728 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 RPL17P18621 184 aaKnown RBP14.6□□□□□ -0.07
CNOT3-201ENST00000221232 DNAJB1P25685 340 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 EEF1DP29692 281 aaKnown RBP14.6□□□□□ -0.07
CNOT3-201ENST00000221232 DIO3P55073 304 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 GRM2Q14416 872 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 TSNQ15631 228 aaKnown RBP14.6□□□□□ -0.07
CNOT3-201ENST00000221232 MRNIPQ6NTE8 343 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 SLC24A5Q71RS6 500 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 SPPL2CQ8IUH8 684 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 CLYBLQ8N0X4 340 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 ADCY4Q8NFM4 1077 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 CANT1Q8WVQ1 401 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 CDKN2AIPNLQ96HQ2 116 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 HBEGFQ99075 208 aa14.6□□□□□ -0.07
CNOT3-201ENST00000221232 V9GYQ6 96 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms