RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 BCL7BQ9BQE9 202 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 WDR18Q9BV38 432 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TMEM45AQ9NWC5 275 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TAS2R7Q9NYW3 318 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 MARCH2Q9P0N8 246 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ZNF69Q9UC07 566 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ZNF214Q9UL59 606 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 M0QX08 132 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SERPINA1P01009 418 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SP100P23497 879 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 ERP29P30040 261 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 CHKAP35790 457 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ATP5C1P36542 298 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 GRM5P41594 1212 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 NDST2P52849 883 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 MFSD10Q14728 455 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 VSTM1Q6UX27 236 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 NECAB2Q7Z6G3 386 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 GIPC3Q8TF64 312 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 STYXQ8WUJ0 223 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 KAT5Q92993 513 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SH2D3AQ9BRG2 576 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 NIFKQ9BYG3 293 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 TMEM59LQ9UK28 342 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CFL2Q9Y281 166 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TMED5Q9Y3A6 229 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SAMHD1Q9Y3Z3 626 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 H0YC42 278 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CBX4O00257 560 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PER2O15055 1255 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 UGT2B17O75795 530 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 NOL4O94818 638 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SERPINA3P01011 423 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ALDH2P05091 517 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ALDH9A1P49189 494 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 GMPSP49915 693 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 ZFP69Q49AA0 526 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 C5orf22Q49AR2 442 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ZZZ3Q8IYH5 903 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 DEFB106AQ8N104 65 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 C10orf53Q8N6V4 93 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CDYL2Q8N8U2 506 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ZNF671Q8TAW3 534 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SKA1Q96BD8 255 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 REXO5Q96IC2 774 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 ATP13A1Q9HD20 1204 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SPG21Q9NZD8 308 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CALML5Q9NZT1 146 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SCN8AQ9UQD0 1980 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PIGBOS1A0A0B4J2F0 54 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 METTL21EPA6NDL7 271 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PTGES3LE9PB15 166 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 RPP40O75818 363 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 PRPS2P11908 318 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 GYS1P13807 737 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 POU1F1P28069 291 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 HSD17B2P37059 387 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CLK3P49761 638 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 GSCP56915 257 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 HSF2Q03933 536 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CACNB2Q08289 660 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 DMPKQ09013 629 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PYDC2Q56P42 97 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FGD3Q5JSP0 725 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 LCN1P1Q5VSP4 162 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CYP2R1Q6VVX0 501 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 UNC5AQ6ZN44 842 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CUZD1Q86UP6 607 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PHACTR4Q8IZ21 702 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ENDOVQ8N8Q3 282 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 MCFD2Q8NI22 146 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ZSCAN18Q8TBC5 510 aaPredicted RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 BTN2A3PQ96KV6 586 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SNRNP25Q9BV90 132 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 SPATA9Q9BWV2 254 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ADAM33Q9BZ11 813 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ALG2Q9H553 416 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 NECTIN3Q9NQS3 549 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 MAN1C1Q9NR34 630 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 RNF181Q9P0P0 153 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TRPC4Q9UBN4 977 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 PFDN2Q9UHV9 154 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 RAB23Q9ULC3 237 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 A0A0J9YYE9 177 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FAM86C2PA6NEL3 165 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 DCDC2CA8MYV0 355 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TEX46H3BTG2 121 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 LYNP07948 512 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SPATA31C1P0DKV0 1188 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 AMPD1P23109 780 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 FEN1P39748 380 aaKnown RBP4.41□□□□□ -1.7
CHD9-201ENST00000219084 MTHFRP42898 656 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 CLCN3P51790 818 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 NAGLUP54802 743 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 KLHL22Q53GT1 634 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SLCO6A1Q86UG4 719 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 TSPEARQ8WU66 669 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 OR52E6Q96RD3 313 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 ADGRE2Q9UHX3 823 aa4.41□□□□□ -1.7
CHD9-201ENST00000219084 SCAF8Q9UPN6 1271 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms