RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 HMGB4Q8WW32 186 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 DPEP2Q9H4A9 486 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 CD84Q9UIB8 345 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 INVSQ9Y283 1065 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 KLHL20Q9Y2M5 609 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 GRIN2DO15399 1336 aa10.35□□□□□ -0.75
NIPAL3-201ENST00000003912 BIRC5O15392 142 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 HNRNPA1P09651 372 aaKnown RBP eCLIP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ITGAXP20702 1163 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 RUNX1T1Q06455 604 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TMPRSS6Q8IU80 811 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SIPA1Q96FS4 1042 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CCT7Q99832 543 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ACAT2Q9BWD1 397 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 UGT2B28Q9BY64 529 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SMOC2Q9H3U7 446 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 EXOSC4Q9NPD3 245 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 IL36AQ9UHA7 158 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 GGA2Q9UJY4 613 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CORO2BQ9UQ03 480 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CD48P09326 243 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 COL6A2P12110 1019 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 MAT2AP31153 395 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 HTRA3P83110 453 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TAF1AQ15573 450 aaPredicted RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CPSF6Q16630 551 aaKnown RBP eCLIP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 INAVAQ3KP66 663 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ATXN7L2Q5T6C5 722 aaPredicted RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SNX30Q5VWJ9 437 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SYPL2Q5VXT5 272 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 KIAA0408Q6ZU52 694 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 PLD3Q8IV08 490 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TRMOQ9BU70 441 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 R3HDM2Q9Y2K5 976 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF780BQ9Y6R6 833 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 PIRO00625 290 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 PEX11AO75192 247 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ALG11Q2TAA5 492 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 PARGQ86W56 976 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 OSTM1Q86WC4 334 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 DHFR2Q86XF0 187 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 GPR156Q8NFN8 814 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SPATA22Q8NHS9 363 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 DTNBP1Q96EV8 351 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TBATAQ96M53 351 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TCF12Q99081 682 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SPATA5L1Q9BVQ7 753 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ABCG8Q9H221 673 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SFXN1Q9H9B4 322 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 DNAJC11Q9NVH1 559 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SAGE1Q9NXZ1 904 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 HEBP2Q9Y5Z4 205 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 EDDM13A0A1B0GTR0 161 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 OR6A2O95222 327 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 KRT75O95678 551 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 NOS3P29474 1203 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CMPK1P30085 196 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 GABRB2P47870 512 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 IRX1P78414 480 aaPredicted RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SAMD4BQ5PRF9 694 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CFAP206Q8IYR0 622 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 MREGQ8N565 214 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SRFBP1Q8NEF9 429 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TPD52L3Q96J77 140 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TEKT5Q96M29 485 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ADAMTS10Q9H324 1103 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SPATS2LQ9NUQ6 558 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 RAP2CQ9Y3L5 183 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 AZIN1O14977 448 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 DCXO43602 365 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CNMDO75829 334 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SERPINI2O75830 405 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ANXA6P08133 673 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 NUDT17P0C025 328 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CRATP43155 626 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 HCAR3P49019 387 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 RPL38P63173 70 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SQLEQ14534 574 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 LSM12Q3MHD2 195 aaKnown RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TBCELQ5QJ74 424 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 TSTD2Q5T7W7 516 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 FBXL22Q6P050 247 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 RNF19BQ6ZMZ0 732 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 SNX32Q86XE0 403 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 HID1Q8IV36 788 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ZSCAN18Q8TBC5 510 aaPredicted RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF514Q96K75 400 aaPredicted RBP10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 EXO5Q9H790 373 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 CHRAC1Q9NRG0 131 aa10.34□□□□□ -0.75
NIPAL3-201ENST00000003912 OR2AG2A6NM03 316 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SOCS7O14512 581 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 UPP1Q16831 310 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 ATP13A5Q4VNC0 1218 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 IYDQ6PHW0 289 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 GDPD4Q6W3E5 623 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 PCDH19Q8TAB3 1148 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 OTUB2Q96DC9 234 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms