RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 STC1P52823 247 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 PTPN5P54829 565 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 RPS21P63220 83 aaKnown RBP12.32□□□□□ -0.44
LINC00339-213ENST00000642137 SEMG2Q02383 582 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 DMWDQ09019 674 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 PDIA2Q13087 525 aaKnown RBP12.32□□□□□ -0.44
LINC00339-213ENST00000642137 NAA30Q147X3 362 aaPredicted RBP12.32□□□□□ -0.44
LINC00339-213ENST00000642137 AGERQ15109 404 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 CNGA3Q16281 694 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 TMEM31Q5JXX7 168 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 DENND2CQ68D51 928 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 SLC36A4Q6YBV0 504 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 TECPR1Q7Z6L1 1165 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 TSPAN33Q86UF1 283 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 FAM124AQ86V42 546 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 NLRP8Q86W28 1048 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 NRSN1Q8IZ57 195 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 PPHLN1Q8NEY8 458 aaKnown RBP12.32□□□□□ -0.44
LINC00339-213ENST00000642137 MYRIPQ8NFW9 859 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 RLN3Q8WXF3 142 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 ASB12Q8WXK4 309 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 NELL1Q92832 810 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 EID2BQ96D98 161 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 TOE1Q96GM8 510 aaKnown RBP12.32□□□□□ -0.44
LINC00339-213ENST00000642137 FMO2Q99518 471 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 EBNA1BP2Q99848 306 aaKnown RBP12.32□□□□□ -0.44
LINC00339-213ENST00000642137 PCED1AQ9H1Q7 454 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 CD93Q9NPY3 652 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 CHRAC1Q9NRG0 131 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 RAD18Q9NS91 495 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 PKD2L2Q9NZM6 624 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 GGT7Q9UJ14 662 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 ITM2BQ9Y287 266 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 ARL5AQ9Y689 179 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 TEX264Q9Y6I9 313 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 PLXND1Q9Y4D7 1925 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 TRPM6Q9BX84 2022 aa12.32□□□□□ -0.44
LINC00339-213ENST00000642137 EML5Q05BV3 1969 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 A0A0U1RQS6 177 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 FAM86C2PA6NEL3 165 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 STX7O15400 261 aaKnown RBP12.31□□□□□ -0.44
LINC00339-213ENST00000642137 LZTS3O60299 673 aaPredicted RBP12.31□□□□□ -0.44
LINC00339-213ENST00000642137 RNGTTO60942 597 aaKnown RBP12.31□□□□□ -0.44
LINC00339-213ENST00000642137 NDUFS2O75306 463 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 TM7SF2O76062 418 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 C1SP09871 688 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 HADHAP40939 763 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 ELK3P41970 407 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 MAGEA4P43358 317 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 SPINT3P49223 89 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 FNTBP49356 437 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 CCR5P51681 352 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 VSNL1P62760 191 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 CRADDP78560 199 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 MTM1Q13496 603 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 CCDC38Q502W7 563 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 TSTD2Q5T7W7 516 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 ZDHHC20Q5W0Z9 365 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 CYP2U1Q7Z449 544 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 TMEM135Q86UB9 458 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 TRIM69Q86WT6 500 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 HORMAD1Q86X24 394 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 AGGF1Q8N302 714 aaeCLIP12.31□□□□□ -0.44
LINC00339-213ENST00000642137 MPP5Q8N3R9 675 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 OR4K2Q8NGD2 314 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 DTX3LQ8TDB6 740 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 PYROXD1Q8WU10 500 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 SPACA7Q96KW9 195 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 COQ10AQ96MF6 247 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 WRAP53Q9BUR4 548 aaKnown RBP12.31□□□□□ -0.44
LINC00339-213ENST00000642137 C1QTNF2Q9BXJ5 285 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 SLC17A9Q9BYT1 436 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 CDH19Q9H159 772 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 SAYSD1Q9NPB0 183 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 NLE1Q9NVX2 485 aaPredicted RBP12.31□□□□□ -0.44
LINC00339-213ENST00000642137 SAMD15Q9P1V8 674 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 ZFR2Q9UPR6 939 aaKnown RBP12.31□□□□□ -0.44
LINC00339-213ENST00000642137 PKP3Q9Y446 797 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 KCTD3Q9Y597 815 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 LRRK1Q38SD2 2015 aa12.31□□□□□ -0.44
LINC00339-213ENST00000642137 A0A1W2PQU0 124 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 IGLON5A6NGN9 336 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 H7C0S8 307 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 WNT9AO14904 365 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-213ENST00000642137 USP1O94782 785 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 TTC4O95801 387 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 C6P13671 934 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 GM2AP17900 193 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 PGAM1P18669 254 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 CNR2P34972 360 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 ZNF140P52738 457 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-213ENST00000642137 ACVR1Q04771 509 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 SEPT6Q14141 434 aa12.3□□□□□ -0.44
LINC00339-213ENST00000642137 NUMA1Q14980 2115 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms