RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ENPP7	Q6UWV6	458 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	DHRS13	Q6UX07	377 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	CCNI2	Q6ZMN8	369 aa	Predicted RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	TSPAN33	Q86UF1	283 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	RBFA	Q8N0V3	343 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	TXLNB	Q8N3L3	684 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	GALNT15	Q8N3T1	639 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	FAM181A	Q8N9Y4	354 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	DTD2	Q96FN9	168 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	WDR92	Q96MX6	357 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	PCDH9	Q9HC56	1237 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	SAE1	Q9UBE0	346 aa	Predicted RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	RPL26L1	Q9UNX3	145 aa	Known RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	ANKRD11	Q6UB99	2663 aa	Predicted RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	C1QTNF9B	B2RNN3	333 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	TPP1	O14773	563 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	GCAT	O75600	419 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	PRL	P01236	227 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	MMP2	P08253	660 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	HOXC4	P09017	264 aa	Predicted RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	C1QTNF9	P0C862	333 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	PECAM1	P16284	738 aa	Predicted RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	ETV3	P41162	512 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	HK3	P52790	923 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	SKOR1	P84550	965 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	ADCY2	Q08462	1091 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	ALG11	Q2TAA5	492 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	ZCCHC8	Q6NZY4	707 aa	Known RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	PNCK	Q6P2M8	343 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	B4GALNT4	Q76KP1	1039 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	HSD11B1L	Q7Z5J1	315 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	HID1	Q8IV36	788 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	KIAA1524	Q8TCG1	905 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	TFB1M	Q8WVM0	346 aa	Known RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	P3H4	Q92791	437 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	TSACC	Q96A04	125 aa	Predicted RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	FUBP1	Q96AE4	644 aa	Known RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	APOLD1	Q96LR9	279 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	AGAP3	Q96P47	875 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	LRRC61	Q9BV99	259 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	CEP41	Q9BYV8	373 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	WDR26	Q9H7D7	661 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	USP29	Q9HBJ7	922 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	KL	Q9UEF7	1012 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	DNPEP	Q9ULA0	475 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	PCDHA3	Q9Y5H8	950 aa		15.04	■□□□□ -0
PHGDH-231	ENST00000641939	KMT2B	Q9UMN6	2715 aa	Predicted RBP	15.04	■□□□□ -0
PHGDH-231	ENST00000641939	CAPN8	A6NHC0	703 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	LMO7DN	F2Z398	122 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	RASGRP1	O95267	797 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	PROS1	P07225	676 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	CKMT1A	P12532	417 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	TSHR	P16473	764 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	ZNF30	P17039	623 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	SRP54	P61011	504 aa	Known RBP	15.03	■□□□□ -0
PHGDH-231	ENST00000641939	COPS2	P61201	443 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	PTS	Q03393	145 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	KIF5A	Q12840	1032 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	C1orf61	Q13536	156 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	PRKD1	Q15139	912 aa	Predicted RBP	15.03	■□□□□ -0
PHGDH-231	ENST00000641939	PPP2R5E	Q16537	467 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	DEFB133	Q30KQ1	61 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	TEX44	Q53QW1	395 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	LRRC66	Q68CR7	880 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	CRTC1	Q6UUV9	634 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939		Q6ZVL8	140 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	NT5DC3	Q86UY8	548 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	PELI3	Q8N2H9	469 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	FSTL5	Q8N475	847 aa	Predicted RBP	15.03	■□□□□ -0
PHGDH-231	ENST00000641939	LPCAT1	Q8NF37	534 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	OR56A4	Q8NGH8	313 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	IMP4	Q96G21	291 aa	Known RBP	15.03	■□□□□ -0
PHGDH-231	ENST00000641939	SMIM14	Q96QK8	99 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	ADGRE3	Q9BY15	652 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	SLC25A51	Q9H1U9	297 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	EVA1B	Q9NVM1	165 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	APC2	O95996	2303 aa		15.03	■□□□□ -0
PHGDH-231	ENST00000641939	FREM2	Q5SZK8	3169 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	LY6G6E	A0A0G2JKS1	128 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939		A0A0U1RQS6	177 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	CCDC66	A2RUB6	948 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	GRID2IP	A4D2P6	1211 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	TMEM202	A6NGA9	273 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	ANKRD66	B4E2M5	251 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	MTSS1	O43312	755 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	CTSE	P14091	401 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	KEL	P23276	732 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	PTPN3	P26045	913 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	CTNNA2	P26232	953 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	DUSP3	P51452	185 aa	Predicted RBP	15.02	■□□□□ -0
PHGDH-231	ENST00000641939	ELOC	Q15369	112 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	FAM182A	Q5T1J6	154 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	BBS12	Q6ZW61	710 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	RD3	Q7Z3Z2	195 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	TECPR1	Q7Z6L1	1165 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	TMPRSS12	Q86WS5	348 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	LRRC57	Q8N9N7	239 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	HAUS1	Q96CS2	278 aa		15.02	■□□□□ -0
PHGDH-231	ENST00000641939	PDXP	Q96GD0	296 aa		15.02	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms