RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SKOR1P84550 965 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 RHDQ02161 417 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 NSUN2Q08J23 767 aaKnown RBP eCLIP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MPP3Q13368 585 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 CUL1Q13616 776 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 HLTFQ14527 1009 aaKnown RBP eCLIP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MORF4L2Q15014 288 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 E2F5Q15329 346 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 TPSAB1Q15661 275 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 PCSK7Q16549 785 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 CARD16Q5EG05 197 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 RALGPS1Q5JS13 557 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 HIBCHQ6NVY1 386 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 NCEH1Q6PIU2 408 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 KDELC1Q6UW63 502 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 ZDHHC24Q6UX98 284 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 KIAA1324Q6UXG2 1013 aaKnown RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 PCGF5Q86SE9 256 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 SRLQ86TD4 932 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 HOOK3Q86VS8 718 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MARCH9Q86YJ5 346 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 GSPT2Q8IYD1 628 aaKnown RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 ZCCHC9Q8N567 271 aaKnown RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 NAT8LQ8N9F0 302 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 FAM181AQ8N9Y4 354 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 CADM4Q8NFZ8 388 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 BAHD1Q8TBE0 780 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 DNASE2BQ8WZ79 361 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 PRCCQ92733 491 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 ACOX2Q99424 681 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 TMEM245Q9H330 911 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 MTG2Q9H4K7 406 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 LRRC40Q9H9A6 602 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 NOD2Q9HC29 1040 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 TOR4AQ9NXH8 423 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 HECAQ9UBI9 543 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-228ENST00000641847 FAM153AQ9UHL3 310 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 ANAPC5Q9UJX4 755 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 SHOC2Q9UQ13 582 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 PLXNB3Q9ULL4 1909 aa9.46□□□□□ -0.9
PHGDH-228ENST00000641847 ANKRD36A6QL64 1941 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 PCDH15Q96QU1 1955 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 MYO18AQ92614 2054 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 ERI2A8K979 691 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 GOLGA8MH3BSY2 632 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 NPC1O15118 1278 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 PSMD3O43242 534 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 CTIFO43310 598 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 SIN3BO75182 1162 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 PMPCBO75439 489 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 WISP1O95388 367 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 PIGNO95427 931 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 CHRM1P11229 460 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 CES1P23141 567 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 TNFRSF8P28908 595 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 OXTRP30559 389 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 GKP32189 559 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 WASP42768 502 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 CSNK1DP48730 415 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 CARSP49589 748 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 AFF3P51826 1226 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 DRG2P55039 364 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 PLTPP55058 493 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 UCNP55089 124 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 VSNL1P62760 191 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 CXADRP78310 365 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 TRAF2Q12933 501 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 OLIG2Q13516 323 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 SPARCL1Q14515 664 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 IHHQ14623 411 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 STARD3Q14849 445 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 TEAD4Q15561 434 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 SLC14A2Q15849 920 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 HNRNPA1L2Q32P51 320 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 BROXQ5VW32 411 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 KCTD11Q693B1 232 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 DHRS13Q6UX07 377 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 DBX2Q6ZNG2 339 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 DPY19L3Q6ZPD9 716 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 KLHDC8BQ8IXV7 354 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 CHST14Q8NCH0 376 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 OR2A12Q8NGT7 310 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 GRIN3AQ8TCU5 1115 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 FGF11Q92914 225 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 PTPRN2Q92932 1015 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 ART4Q93070 314 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 TADA1Q96BN2 335 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 MRGPRX2Q96LB1 330 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 NSMCE3Q96MG7 304 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 FICDQ9BVA6 458 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 FSD1LQ9BXM9 530 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 TDRD1Q9BXT4 1180 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 NEUROG2Q9H2A3 272 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 ZDHHC6Q9H6R6 413 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 ATP13A3Q9H7F0 1226 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 IL21RQ9HBE5 538 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 FTSJ1Q9UET6 329 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 FNDC3AQ9Y2H6 1198 aaKnown RBP9.45□□□□□ -0.9
PHGDH-228ENST00000641847 STON1Q9Y6Q2 735 aa9.45□□□□□ -0.9
PHGDH-228ENST00000641847 PTPRQQ9UMZ3 2332 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms