RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 GALPQ9UBC7 116 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 GREB1Q4ZG55 1949 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 SLC12A8A0AV02 714 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 NCF1BA6NI72 391 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF839A8K0R7 811 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 NCF1CA8MVU1 366 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 NR5A2O00482 541 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 SCAMP3O14828 347 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 TRIM24O15164 1050 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 SLC22A2O15244 555 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 GPR39O43194 453 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 DENRO43583 198 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 WISP3O95389 354 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 PABPC4LP0CB38 370 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 NCF1P14598 390 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF26P17031 533 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 IMPDH1P20839 514 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 CES1P23141 567 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 GATMP50440 423 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 TAF10Q12962 218 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 RFTN1Q14699 578 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 NADSYN1Q6IA69 706 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 SCIMPQ6UWF3 145 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 BEND5Q7L4P6 421 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 ASB9Q96DX5 294 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 C19orf60Q96EN9 201 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 ZNF512Q96ME7 567 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 NOL11Q9H8H0 719 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 MID1IP1Q9NPA3 183 aa16.84■□□□□ 0.29
PHGDH-223ENST00000641597 TSR3Q9UJK0 312 aaKnown RBP16.84■□□□□ 0.29
PHGDH-223ENST00000641597 VWA8A3KMH1 1905 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 PLOD2O00469 737 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 TIPRLO75663 272 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 CDK14O94921 469 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 SNRPB2P08579 225 aaKnown RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 LINC00032P0C843 101 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 PIM1P11309 404 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 MTHFD2P13995 350 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 CD1DP15813 335 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 RHOQP17081 205 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 RGRP47804 291 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 FKBP1BP68106 108 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 SQLEQ14534 574 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 MBTPS1Q14703 1052 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 CYTH1Q15438 398 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 NADK2Q4G0N4 442 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 HMBOX1Q6NT76 420 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 RSPO2Q6UXX9 243 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 RBM44Q6ZP01 1051 aaKnown RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 MYO1HQ8N1T3 1032 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 TRPC4APQ8TEL6 797 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 LINC01599Q8WXQ3 324 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 TUBB1Q9H4B7 451 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.83■□□□□ 0.282e-10■□□□□ 9.2
PHGDH-223ENST00000641597 EGFL7Q9UHF1 273 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 SCML2Q9UQR0 700 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 AP4S1Q9Y587 144 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 UBA6A0AVT1 1052 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 FAM149AA5PLN7 773 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 PIP5K1BO14986 540 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 ADAMTS4O75173 837 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 RBP1P09455 135 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 SLC2A3P11169 496 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 BMP1P13497 986 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 ELNP15502 786 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 PRDX3P30048 256 aaKnown RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 ADSLP30566 484 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 POLD2P49005 469 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 RAB27AP51159 221 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 KIF19Q2TAC6 998 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 PLA2G4EQ3MJ16 856 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 VARS2Q5ST30 1063 aaKnown RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 IFNL1Q8IU54 200 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 HERC6Q8IVU3 1022 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 DIS3LQ8TF46 1054 aaKnown RBP16.83■□□□□ 0.28
PHGDH-223ENST00000641597 C1orf74Q96LT6 269 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 MFSD1Q9H3U5 465 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 TMEM248Q9NWD8 314 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 MARCH2Q9P0N8 246 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 TIMM22Q9Y584 194 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 SPO11Q9Y5K1 396 aa16.83■□□□□ 0.28
PHGDH-223ENST00000641597 NT5C1B-RDH14C9J2C7 533 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 CD3EAPO15446 510 aaKnown RBP16.82■□□□□ 0.28
PHGDH-223ENST00000641597 SLC7A4O43246 635 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 NRP2O60462 931 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 TPST1O60507 370 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 RAMP2O60895 175 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 FLT3LGP49771 235 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 ZFP1Q6P2D0 407 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 DDIASQ8IXT1 998 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 OR7D4Q8NG98 312 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 CALML6Q8TD86 181 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 GIPC2Q8TF65 315 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 NUDT8Q8WV74 236 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 PRICKLE1Q96MT3 831 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-223ENST00000641597 SEPT5Q99719 369 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-223ENST00000641597 SH3GL3Q99963 347 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms