RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 DHX9Q08211 1270 aaKnown RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 MTM1Q13496 603 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 THOC5Q13769 683 aaKnown RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 SETMARQ53H47 684 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 CERCAMQ5T4B2 595 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 PIP5KL1Q5T9C9 394 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 NEK5Q6P3R8 708 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 LYSMD3Q7Z3D4 306 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 LONP2Q86WA8 852 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 MYRIPQ8NFW9 859 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 SEC14L1Q92503 715 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 ZNF669Q96BR6 464 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 MCCC1Q96RQ3 725 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 FAM126AQ9BYI3 521 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 CDH19Q9H159 772 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 VPS37BQ9H9H4 285 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 ITM2CQ9NQX7 267 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 POLR3BQ9NW08 1133 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 SYBUQ9NX95 663 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 GRHL1Q9NZI5 618 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 APPL1Q9UKG1 709 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 FBXO4Q9UKT5 387 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 CHMP2BQ9UQN3 213 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 FADS3Q9Y5Q0 445 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 SLC30A1Q9Y6M5 507 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 FAM169AQ9Y6X4 670 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 CCDC163A0A0D9SF12 145 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 RGSL1A5PLK6 1076 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 NPIPB15A6NHN6 443 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-218ENST00000641491 WNT9AO14904 365 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 RNGTTO60942 597 aaKnown RBP12.96□□□□□ -0.33
PHGDH-218ENST00000641491 AVILO75366 819 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 SPAG6O75602 509 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 CLDN7O95471 211 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 PYGLP06737 847 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 IVDP26440 423 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 AKT2P31751 481 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 DRD3P35462 400 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 NUDT1P36639 197 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 SPAM1P38567 509 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 GRIA1P42261 906 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 TMPRSS15P98073 1019 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 WDR93Q6P2C0 686 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 ZC3H14Q6PJT7 736 aaKnown RBP12.96□□□□□ -0.33
PHGDH-218ENST00000641491 RASSF3Q86WH2 238 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 ANKMY2Q8IV38 441 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 TMEM105Q8N8V8 129 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 FBXO36Q8NEA4 188 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 OR6P1Q8NGX9 317 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 STYXQ8WUJ0 223 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 CDKL2Q92772 493 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 FOXJ1Q92949 421 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 NUS1Q96E22 293 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 RANBP9Q96S59 729 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 LYSMD1Q96S90 227 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 ANKZF1Q9H8Y5 726 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 MRM3Q9HC36 420 aaKnown RBP12.96□□□□□ -0.33
PHGDH-218ENST00000641491 PRMT8Q9NR22 394 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-218ENST00000641491 USP36Q9P275 1121 aaKnown RBP12.96□□□□□ -0.33
PHGDH-218ENST00000641491 TXNDC16Q9P2K2 825 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 ITM2BQ9Y287 266 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 PPIL1Q9Y3C6 166 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 ARL5AQ9Y689 179 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 RPS6KL1Q9Y6S9 549 aa12.96□□□□□ -0.33
PHGDH-218ENST00000641491 A0A1W2PQU0 124 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CCDC78A2IDD5 438 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 MMP20O60882 483 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 RPP40O75818 363 aaKnown RBP12.95□□□□□ -0.34
PHGDH-218ENST00000641491 PRLP01236 227 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-218ENST00000641491 C6P13671 934 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 ITGALP20701 1170 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 STX2P32856 288 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 ELK3P41970 407 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 FNTBP49356 437 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 METAP1P53582 386 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CRADDP78560 199 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 SEMG2Q02383 582 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 ITGA9Q13797 1035 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CNGA3Q16281 694 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 TMEM52BQ4KMG9 183 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 AARS2Q5JTZ9 985 aaKnown RBP12.95□□□□□ -0.34
PHGDH-218ENST00000641491 SPANXN3Q5MJ09 141 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 HP1BP3Q5SSJ5 553 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-218ENST00000641491 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 ALS2CLQ60I27 953 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 EMBQ6PCB8 327 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 AFTPHQ6ULP2 937 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CRTC1Q6UUV9 634 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CAPN12Q6ZSI9 719 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 LPCAT2Q7L5N7 544 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CAND1Q86VP6 1230 aaKnown RBP12.95□□□□□ -0.34
PHGDH-218ENST00000641491 WDR5BQ86VZ2 330 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 HORMAD1Q86X24 394 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms