RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CFAP69A5D8W1 941 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 NPIPB15A6NHN6 443 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-213ENST00000641272 PEX11BO96011 259 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 MYCLP1P12525 358 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-213ENST00000641272 CTPS1P17812 591 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 CCKBRP32239 447 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 VIPR1P32241 457 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 GJC1P36383 396 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 ARL4AP40617 200 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 ETV3P41162 512 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 MLLT3P42568 568 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-213ENST00000641272 GNPDA1P46926 289 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 RENBPP51606 427 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 MAPK10P53779 464 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 POLR2LP62875 67 aaKnown RBP16.72■□□□□ 0.27
PHGDH-213ENST00000641272 HLTFQ14527 1009 aaKnown RBP eCLIP16.72■□□□□ 0.27
PHGDH-213ENST00000641272 TDRD12Q587J7 1177 aaKnown RBP16.72■□□□□ 0.27
PHGDH-213ENST00000641272 PHF19Q5T6S3 580 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 RAET1GQ6H3X3 334 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 HSD11B1LQ7Z5J1 315 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 TSPAN33Q86UF1 283 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 OR6C4Q8NGE1 309 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 PATE1Q8WXA2 126 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 TMEM74Q96NL1 305 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 CSPG4P5Q96PW8 444 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 RDH14Q9HBH5 336 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 NOD2Q9HC29 1040 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 LRIT1Q9P2V4 623 aa16.72■□□□□ 0.27
PHGDH-213ENST00000641272 PRAMEF33A0A0G2JMD5 474 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 PRAMEF10O60809 474 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 SOCS5O75159 536 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 HEXIM1O94992 359 aaKnown RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 GLB1P16278 677 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 AK4P27144 223 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 TRIM23P36406 574 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 PRKCIP41743 596 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 NSUN2Q08J23 767 aaKnown RBP eCLIP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 EIF3IQ13347 325 aaKnown RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 ARHGEF7Q14155 803 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 DPYSL2Q16555 572 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 AMZ1Q400G9 498 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 FILIP1LQ4L180 1135 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 SLC30A9Q6PML9 568 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 VASH2Q86V25 355 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 PSTKQ8IV42 348 aaKnown RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 TRIM11Q96F44 468 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 DTD2Q96FN9 168 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 ZNF599Q96NL3 588 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 NAP1L5Q96NT1 182 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 SMIM14Q96QK8 99 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 NUDCD1Q96RS6 583 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 CCNL2Q96S94 520 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 MGME1Q9BQP7 344 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 NAT10Q9H0A0 1025 aaKnown RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 PHPT1Q9NRX4 125 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 SPATS2LQ9NUQ6 558 aaKnown RBP16.71■□□□□ 0.27
PHGDH-213ENST00000641272 AIPL1Q9NZN9 384 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 FOXJ2Q9P0K8 574 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 COL6A6A6NMZ7 2263 aa16.71■□□□□ 0.27
PHGDH-213ENST00000641272 AHCTF1Q8WYP5 2266 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 TNFRSF10CO14798 259 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 HTRA2O43464 458 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-213ENST00000641272 MAFKO60675 156 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 RARAP10276 462 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 GZMAP12544 262 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 CCNB1P14635 433 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 CR2P20023 1033 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 PCK1P35558 622 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 MMP13P45452 471 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 POLD2P49005 469 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 HCAR3P49019 387 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 RFLNAQ6ZTI6 216 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 TRIM74Q86UV6 250 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 NRROSQ86YC3 692 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 LZTR1Q8N653 840 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 KIAA1524Q8TCG1 905 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 ZDHHC1Q8WTX9 485 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 SNRNP27Q8WVK2 155 aaKnown RBP16.7■□□□□ 0.26
PHGDH-213ENST00000641272 SEMA6CQ9H3T2 930 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 PCDH18Q9HCL0 1135 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 NT5MQ9NPB1 228 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 CD84Q9UIB8 345 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 APPL1Q9UKG1 709 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 PCDHGA7Q9Y5G6 932 aa16.7■□□□□ 0.26
PHGDH-213ENST00000641272 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 A0A1W2PQC6 194 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 MFSD11O43934 449 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 MAP3K6O95382 1288 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 FUCA1P04066 466 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 CEACAM5P06731 702 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 MYBL1P10243 752 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 SSR1P43307 286 aaKnown RBP16.69■□□□□ 0.26
PHGDH-213ENST00000641272 ZNF135P52742 658 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-213ENST00000641272 OR1D5P58170 312 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 CDK3Q00526 305 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms