RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ERI2A8K979 691 aaKnown RBP13.2□□□□□ -0.3
GTF3A-209ENST00000640289 PRAMEF26H0Y7S4 382 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 PSMD11O00231 422 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 TTI1O43156 1089 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 BUD23O43709 281 aaKnown RBP13.2□□□□□ -0.3
GTF3A-209ENST00000640289 SUN1O94901 812 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 CFIP05156 583 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 APRTP07741 180 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 TPH1P17752 444 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 AKT2P31751 481 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 IGFALSP35858 605 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 NUDT1P36639 197 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 STC1P52823 247 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 RACK1P63244 317 aaKnown RBP13.2□□□□□ -0.3
GTF3A-209ENST00000640289 DR1Q01658 176 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 SPEM2Q0P670 501 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 PTK6Q13882 451 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 STAT4Q14765 748 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 AGERQ15109 404 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 IRF4Q15306 451 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 WHAMMP3Q1A5X7 153 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 WSCD2Q2TBF2 565 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 TRIM61Q5EBN2 209 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 ZNF572Q7Z3I7 529 aaPredicted RBP13.2□□□□□ -0.3
GTF3A-209ENST00000640289 TECPR1Q7Z6L1 1165 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 JAMLQ86YT9 394 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 PELI3Q8N2H9 469 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 TMEM145Q8NBT3 493 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 OR52K1Q8NGK4 314 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 ASB12Q8WXK4 309 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 NUS1Q96E22 293 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 DTD2Q96FN9 168 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 LENG8Q96PV6 779 aaPredicted RBP13.2□□□□□ -0.3
GTF3A-209ENST00000640289 HINFPQ9BQA5 517 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 GPR63Q9BZJ6 419 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 ARNT2Q9HBZ2 717 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 SUSD2Q9UGT4 822 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 MUC6Q6W4X9 2439 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 THADAQ6YHU6 1953 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 CACNA1HO95180 2353 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 A0A1B0GVT2 93 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 POM121BA6NF01 834 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 PCCBP05166 539 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 GNSP15586 552 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 CD38P28907 300 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 DPP6P42658 865 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 CKAP4Q07065 602 aaKnown RBP13.19□□□□□ -0.3
GTF3A-209ENST00000640289 KCNJ11Q14654 390 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 LRRC14Q15048 493 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 SF3A2Q15428 464 aaKnown RBP13.19□□□□□ -0.3
GTF3A-209ENST00000640289 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 ANKRD22Q5VYY1 191 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 PPP1R21Q6ZMI0 780 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 GLT6D1Q7Z4J2 308 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 TMC3Q7Z5M5 1100 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 LINC00523Q86TU6 105 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 TTC30BQ8N4P2 665 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 DNAAF3Q8N9W5 541 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 DENND6BQ8NEG7 585 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 CCHCR1Q8TD31 782 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 CPT1BQ92523 772 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 RUBCNQ92622 972 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 SCAMP4Q969E2 229 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 LRRC45Q96CN5 670 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 BMFQ96LC9 184 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 ABCG8Q9H221 673 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 BPIFA1Q9NP55 256 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 PARD6AQ9NPB6 346 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 EIF2B3Q9NR50 452 aaKnown RBP13.19□□□□□ -0.3
GTF3A-209ENST00000640289 SEMA4GQ9NTN9 838 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 KCTD3Q9Y597 815 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 ARL5AQ9Y689 179 aa13.19□□□□□ -0.3
GTF3A-209ENST00000640289 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
GTF3A-209ENST00000640289 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 ESPNB1AK53 854 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 FPGTO14772 594 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 RAD51CO43502 376 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 TMEM63AO94886 807 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 TPSB2P20231 275 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 TGM1P22735 817 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 HOXD12P35452 270 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 ADCY8P40145 1251 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 SPINT3P49223 89 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 AFF3P51826 1226 aaKnown RBP13.18□□□□□ -0.3
GTF3A-209ENST00000640289 IRX4P78413 519 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 BNC1Q01954 994 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 CDH17Q12864 832 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 MTM1Q13496 603 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
GTF3A-209ENST00000640289 PTPRCAPQ14761 206 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 TPSAB1Q15661 275 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 SLC23A3Q6PIS1 610 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 ZNF534Q76KX8 674 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 PTAR1Q7Z6K3 402 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms