RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 GULP1Q9UBP9 304 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 DKK4Q9UBT3 224 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 RABGEF1Q9UJ41 708 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 SALL4Q9UJQ4 1053 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 GPSM3Q9Y4H4 160 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 HEY1Q9Y5J3 304 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 EME2A4GXA9 379 aaPredicted RBP17.73■□□□□ 0.43
PNKP-230ENST00000638016 GOLGA6CA6NDK9 693 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 GOLGA6BA6NDN3 693 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 TLX3O43711 291 aaPredicted RBP17.73■□□□□ 0.43
PNKP-230ENST00000638016 PRLP01236 227 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 GOLGA6DP0CG33 693 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 CTSEP14091 401 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 COMTP21964 271 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 CCNCP24863 283 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 TRIM23P36406 574 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 KIAA1024LP59773 190 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 LRRC66Q68CR7 880 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 ALG1LQ6GMV1 187 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 HEATR4Q86WZ0 1026 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 LRRC49Q8IUZ0 686 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 CCDC13Q8IYE1 715 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 CBARPQ8N350 705 aaPredicted RBP17.73■□□□□ 0.43
PNKP-230ENST00000638016 CNTD1Q8N815 330 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 OR56A4Q8NGH8 313 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 HNRNPLLQ8WVV9 542 aaKnown RBP17.73■□□□□ 0.43
PNKP-230ENST00000638016 NXPE2Q96DL1 559 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 SCRN2Q96FV2 425 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 CRELD1Q96HD1 420 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 TBATAQ96M53 351 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 TDRD1Q9BXT4 1180 aaKnown RBP17.73■□□□□ 0.43
PNKP-230ENST00000638016 TMEM168Q9H0V1 697 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 GOLGA6AQ9NYA3 693 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 MOSPD1Q9UJG1 213 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 DOLKQ9UPQ8 538 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 AK5Q9Y6K8 562 aa17.73■□□□□ 0.43
PNKP-230ENST00000638016 CACNB4O00305 520 aaPredicted RBP17.72■□□□□ 0.43
PNKP-230ENST00000638016 CSO75390 466 aaKnown RBP17.72■□□□□ 0.43
PNKP-230ENST00000638016 JCHAINP01591 159 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 FUCA1P04066 466 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 GP1BAP07359 652 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 MMP2P08253 660 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 CYP2A6P11509 494 aaPredicted RBP17.72■□□□□ 0.43
PNKP-230ENST00000638016 ARHGAP25P42331 645 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 NOP2P46087 812 aaKnown RBP17.72■□□□□ 0.43
PNKP-230ENST00000638016 MARCKSL1P49006 195 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 DUSP3P51452 185 aaPredicted RBP17.72■□□□□ 0.43
PNKP-230ENST00000638016 RALGPS1Q5JS13 557 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 SLC9A4Q6AI14 798 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 MFSD7Q6UXD7 560 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 USP45Q70EL2 814 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 RFX6Q8HWS3 928 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 LPCAT1Q8NF37 534 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 SCAMP4Q969E2 229 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 DCBLD2Q96PD2 775 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 BRD8Q9H0E9 1235 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 CYP4F12Q9HCS2 524 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 LCMT1Q9UIC8 334 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 PPIL1Q9Y3C6 166 aa17.72■□□□□ 0.43
PNKP-230ENST00000638016 A0A0J9YYE9 177 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 A0A1W2PNU3 283 aaPredicted RBP17.71■□□□□ 0.43
PNKP-230ENST00000638016 A0A1W2PQ67 120 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 PMS2P1A4D2B8 440 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 APOL1O14791 398 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 BRINP1O60477 761 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 SOD1P00441 154 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 TNFP01375 233 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 TRBC1P01850 177 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 MPOP05164 745 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 MX2P20592 715 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 MAGEA1P43355 309 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 BLKP51451 505 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 ZNF75DP51815 510 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 PPIDQ08752 370 aaKnown RBP17.71■□□□□ 0.43
PNKP-230ENST00000638016 ARHGEF7Q14155 803 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 RTP5Q14D33 572 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 ELOCQ15369 112 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 COL28A1Q2UY09 1125 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 RAET1GQ6H3X3 334 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 TECPR1Q7Z6L1 1165 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 TRIM74Q86UV6 250 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 FSTL5Q8N475 847 aaPredicted RBP17.71■□□□□ 0.43
PNKP-230ENST00000638016 TPCN2Q8NHX9 752 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.71■□□□□ 0.43
PNKP-230ENST00000638016 FATE1Q969F0 183 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 RBM15Q96T37 977 aaKnown RBP eCLIP17.71■□□□□ 0.43
PNKP-230ENST00000638016 AGAP2Q99490 1192 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 ABCG4Q9H172 646 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 SYNDIG1Q9H7V2 258 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 USP29Q9HBJ7 922 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 SAE1Q9UBE0 346 aaPredicted RBP17.71■□□□□ 0.43
PNKP-230ENST00000638016 PADI4Q9UM07 663 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 GPR34Q9UPC5 381 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 LHX6Q9UPM6 363 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 DGKBQ9Y6T7 804 aa17.71■□□□□ 0.43
PNKP-230ENST00000638016 PRSS38A1L453 326 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 SPOPO43791 374 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 MYCLP1P12525 358 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms