RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 IFI44Q8TCB0 444 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 MAPK15Q8TD08 544 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 PIH1D2Q8WWB5 315 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 FUBP1Q96AE4 644 aaKnown RBP13.82□□□□□ -0.2
PNKP-228ENST00000637325 COQ10AQ96MF6 247 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 WDR26Q9H7D7 661 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 SEPT10Q9P0V9 454 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 CLCA2Q9UQC9 943 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 CHKBQ9Y259 395 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 ALG6Q9Y672 507 aa13.82□□□□□ -0.2
PNKP-228ENST00000637325 ASPMQ8IZT6 3477 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 SRRM3A6NNA2 597 aaPredicted RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 KCNK1O00180 336 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 YY2O15391 372 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 MT-CO3P00414 261 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 GP1BAP07359 652 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 HOXC4P09017 264 aaPredicted RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 GM2AP17900 193 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 LHCGRP22888 699 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 ETV3P41162 512 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 HADHBP55084 474 aaKnown RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 NAP1L1P55209 391 aaKnown RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 CYP4F3Q08477 520 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 NIPAL4Q0D2K0 466 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 TFDP2Q14188 446 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 PTPRRQ15256 657 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 C6orf132Q5T0Z8 1188 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 KAZNQ674X7 775 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 ALG1LQ6GMV1 187 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 RAET1GQ6H3X3 334 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 MFSD7Q6UXD7 560 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 NPNTQ6UXI9 565 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 BZW1Q7L1Q6 419 aaKnown RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 EFL1Q7Z2Z2 1120 aaKnown RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 HSD11B1LQ7Z5J1 315 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 TSPAN33Q86UF1 283 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 SDR16C5Q8N3Y7 309 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 LPCAT1Q8NF37 534 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 OR56A4Q8NGH8 313 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 DTD2Q96FN9 168 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 MCCC1Q96RQ3 725 aaPredicted RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 TDRD1Q9BXT4 1180 aaKnown RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 CLPBQ9H078 707 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 PCDH9Q9HC56 1237 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 PHPT1Q9NRX4 125 aaPredicted RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 GULP1Q9UBP9 304 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 DNPEPQ9ULA0 475 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 TFR2Q9UP52 801 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
PNKP-228ENST00000637325 PPIL1Q9Y3C6 166 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 EPN1Q9Y6I3 576 aaPredicted RBP13.81□□□□□ -0.2
PNKP-228ENST00000637325 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 DMXL2Q8TDJ6 3036 aa13.81□□□□□ -0.2
PNKP-228ENST00000637325 A0A0A6YYK5 440 aaPredicted RBP13.8□□□□□ -0.2
PNKP-228ENST00000637325 LY6G6EA0A0G2JKS1 128 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 A0A0J9YYE9 177 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 TMEM202A6NGA9 273 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 SOWAHDA6NJG2 315 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 OPA1O60313 960 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 FZD6O60353 706 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 TRBC1P01850 177 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 CELA2BP08218 269 aaPredicted RBP13.8□□□□□ -0.2
PNKP-228ENST00000637325 TRIM23P36406 574 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 CD86P42081 329 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 RPL26P61254 145 aaKnown RBP13.8□□□□□ -0.2
PNKP-228ENST00000637325 IFI35P80217 286 aaPredicted RBP13.8□□□□□ -0.2
PNKP-228ENST00000637325 CAMK2BQ13554 666 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 LRRC66Q68CR7 880 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 LVRNQ6Q4G3 990 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 CRTC1Q6UUV9 634 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 Q6ZVL8 140 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 PROSER1Q86XN7 944 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 CCDC50Q8IVM0 306 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 CACTIN-AS1Q8N1I8 211 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 ARRDC2Q8TBH0 407 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 OR1E3Q8WZA6 343 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 NXPE2Q96DL1 559 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 PDXPQ96GD0 296 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 BRD8Q9H0E9 1235 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 GOLPH3Q9H4A6 298 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 CYP4F12Q9HCS2 524 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 MRPL40Q9NQ50 206 aaKnown RBP13.8□□□□□ -0.2
PNKP-228ENST00000637325 SIRPGQ9P1W8 387 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 CD84Q9UIB8 345 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 RPL26L1Q9UNX3 145 aaKnown RBP13.8□□□□□ -0.2
PNKP-228ENST00000637325 GPR34Q9UPC5 381 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 DGKBQ9Y6T7 804 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 U3KQA8 63 aa13.8□□□□□ -0.2
PNKP-228ENST00000637325 EME2A4GXA9 379 aaPredicted RBP13.79□□□□□ -0.2
PNKP-228ENST00000637325 TNFRSF10CO14798 259 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 CST8O60676 142 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 ZRANB2O95218 330 aaKnown RBP eCLIP13.79□□□□□ -0.2
PNKP-228ENST00000637325 NDUFA10O95299 355 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 MYCLP1P12525 358 aaPredicted RBP13.79□□□□□ -0.2
PNKP-228ENST00000637325 ZNF30P17039 623 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 CDKN2BP42772 138 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 GPR1P46091 355 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 NR2C2P49116 596 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms