RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 RFX8Q6ZV50 586 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 IRF2BP2Q7Z5L9 587 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 PIM3Q86V86 326 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 NPWQ8N729 165 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 KIAA1524Q8TCG1 905 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 FNIP1Q8TF40 1166 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 PEBP4Q96S96 227 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 SLC12A9Q9BXP2 914 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 CDH19Q9H159 772 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 DPEP2Q9H4A9 486 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 CYP4F12Q9HCS2 524 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 FANCLQ9NW38 375 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 GEMIN8Q9NWZ8 242 aaKnown RBP16.45■□□□□ 0.22
CLN3-255ENST00000637100 PDP2Q9P2J9 529 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 B4GALT6Q9UBX8 382 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 PPIL1Q9Y3C6 166 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 PTPN13Q12923 2485 aa16.45■□□□□ 0.22
CLN3-255ENST00000637100 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.44■□□□□ 0.22
CLN3-255ENST00000637100 LGALS16A8MUM7 142 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 PYCARD-AS1I3L0S3 204 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 EEF2KO00418 725 aaKnown RBP16.44■□□□□ 0.22
CLN3-255ENST00000637100 SOCS5O75159 536 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 RENBPP51606 427 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 TRA2AQ13595 282 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLN3-255ENST00000637100 TMCO4Q5TGY1 634 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 PPP1R2P3Q6NXS1 205 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 ATG14Q6ZNE5 492 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 ARHGAP36Q6ZRI8 547 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 LZTR1Q8N653 840 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 KCTD15Q96SI1 283 aaPredicted RBP16.44■□□□□ 0.22
CLN3-255ENST00000637100 SNRNP25Q9BV90 132 aaKnown RBP16.44■□□□□ 0.22
CLN3-255ENST00000637100 FAM117AQ9C073 453 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 GPATCH2LQ9NWQ4 482 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 CHMP5Q9NZZ3 219 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 SLC17A4Q9Y2C5 497 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 FLNCQ14315 2725 aa16.44■□□□□ 0.22
CLN3-255ENST00000637100 IGHV5-10-1A0A0J9YXX1 117 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 TMEM191CA6NGB0 347 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 B4DGG1 531 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 PSMD11O00231 422 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 HEXIM1O94992 359 aaKnown RBP16.43■□□□□ 0.22
CLN3-255ENST00000637100 FGF3P11487 239 aaPredicted RBP16.43■□□□□ 0.22
CLN3-255ENST00000637100 CCL4P13236 92 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 ATP1A3P13637 1013 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 LIMK2P53671 638 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 DPTQ07507 201 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 SLC10A7Q0GE19 358 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 DPYSQ14117 519 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 CNGA3Q16281 694 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 DCUN1D2Q6PH85 259 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 VASH2Q86V25 355 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 NLRP8Q86W28 1048 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 NAGSQ8N159 534 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 NKD1Q969G9 470 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 DTD2Q96FN9 168 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 TAAR9Q96RI9 348 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 MCCC1Q96RQ3 725 aaPredicted RBP16.43■□□□□ 0.22
CLN3-255ENST00000637100 CINPQ9BW66 212 aaPredicted RBP16.43■□□□□ 0.22
CLN3-255ENST00000637100 GSDMCQ9BYG8 508 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 SPRY4Q9C004 299 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 ADNPQ9H2P0 1102 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 RDH14Q9HBH5 336 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 PARVAQ9NVD7 372 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 TAAR2Q9P1P5 351 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 SEPT3Q9UH03 358 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 MYO6Q9UM54 1294 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 PCDHB11Q9Y5F2 797 aa16.43■□□□□ 0.22
CLN3-255ENST00000637100 IVLP07476 585 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 TPM2P07951 284 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 FAM87AP0C7U9 286 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 FERP16591 822 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 HSPA9P38646 679 aaKnown RBP16.42■□□□□ 0.22
CLN3-255ENST00000637100 SCNN1BP51168 640 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 MAPK10P53779 464 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 MAZP56270 477 aaKnown RBP16.42■□□□□ 0.22
CLN3-255ENST00000637100 OR1D5P58170 312 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 LBRQ14739 615 aaKnown RBP16.42■□□□□ 0.22
CLN3-255ENST00000637100 RALGPS1Q5JS13 557 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 TMEM164Q5U3C3 297 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 PRICKLE2Q7Z3G6 844 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 TECPR1Q7Z6L1 1165 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 ZSCAN1Q8NBB4 408 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 OR4D9Q8NGE8 314 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 ZDHHC1Q8WTX9 485 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 SCRN2Q96FV2 425 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 NUDCD1Q96RS6 583 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 DPYSL5Q9BPU6 564 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 NUDT22Q9BRQ3 303 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 HSD3B7Q9H2F3 369 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 DHX35Q9H5Z1 703 aaKnown RBP16.42■□□□□ 0.22
CLN3-255ENST00000637100 PHPT1Q9NRX4 125 aaPredicted RBP16.42■□□□□ 0.22
CLN3-255ENST00000637100 TAS2R14Q9NYV8 317 aa16.42■□□□□ 0.22
CLN3-255ENST00000637100 CWC15Q9P013 229 aaKnown RBP16.42■□□□□ 0.22
CLN3-255ENST00000637100 HEMK1Q9Y5R4 338 aaPredicted RBP16.42■□□□□ 0.22
CLN3-255ENST00000637100 SDK2Q58EX2 2172 aa16.41■□□□□ 0.22
CLN3-255ENST00000637100 STMND1H3BQB6 276 aa16.41■□□□□ 0.22
CLN3-255ENST00000637100 PPM1DO15297 605 aa16.41■□□□□ 0.22
CLN3-255ENST00000637100 ZW10O43264 779 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms