RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 DARSP14868 501 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 HOXB6P17509 224 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TFE3P19532 575 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TCN1P20061 433 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ADORA2AP29274 412 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 LRPAP1P30533 357 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ARRB2P32121 409 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 AVPR1AP37288 418 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 INHBCP55103 352 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ADARP55265 1226 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 MAP3K7CLP57077 242 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 RHDQ02161 417 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CBX2Q14781 532 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TLR1Q15399 786 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 INAVAQ3KP66 663 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 NADK2Q4G0N4 442 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CERCAMQ5T4B2 595 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 BTBD8Q5XKL5 378 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 IQSEC1Q6DN90 963 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 MRNIPQ6NTE8 343 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 KLHDC10Q6PID8 442 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 BNIPLQ7Z465 357 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 RNF135Q8IUD6 432 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 AQP12AQ8IXF9 295 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 PYROXD2Q8N2H3 581 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 MIER2Q8N344 545 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CELF5Q8N6W0 485 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 DTWD2Q8NBA8 298 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 LEMD2Q8NC56 503 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 OR2T34Q8NGX1 318 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 OR2T3Q8NH03 318 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 GIMAP1Q8WWP7 306 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 KHSRPQ92945 711 aaKnown RBP eCLIP3.99□□□□□ -1.772e-6■■■□□ 17.2
SCN1A-214ENST00000637038 MTG1Q9BT17 334 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 YTHDF1Q9BYJ9 559 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 NACA2Q9H009 215 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 OSBPL2Q9H1P3 480 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CAB39LQ9H9S4 337 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 RIC8BQ9NVN3 520 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 OR12D3Q9UGF7 316 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 GJD2Q9UKL4 321 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 SMIM28A0A1B0GU29 152 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ZCWPW2A0A1B0GU75 182 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 SNAP91O60641 907 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 IPO13O94829 963 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TOP3BO95985 862 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 C8BP07358 591 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ETS2P15036 469 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF23P17027 643 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ACADVLP49748 655 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 RENBPP51606 427 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 NME5P56597 212 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 KCNK10P57789 538 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 DAOAP59103 153 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 PLOD1Q02809 727 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FOXM1Q08050 763 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 GALNT1Q10472 559 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CSHL1Q14406 222 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 LPIN1Q14693 890 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 KCTD21Q4G0X4 260 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 RAB6CQ53S08 254 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TBCELQ5QJ74 424 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ACBD5Q5T8D3 534 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 REP15Q6BDI9 236 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FAM45BPQ6NSW5 357 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FKBP9P1Q75LS8 142 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 MAVSQ7Z434 540 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 NUP93Q8N1F7 819 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FSTL5Q8N475 847 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FAM45AQ8TCE6 357 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 LRRN4Q8WUT4 740 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ABTB1Q969K4 478 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 THAP11Q96EK4 314 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 MFSD3Q96ES6 412 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 PGAP3Q96FM1 320 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 MAGED4Q96JG8 741 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FCRL3Q96P31 734 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 AGAP2Q99490 1192 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 APOL2Q9BQE5 337 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 COLEC11Q9BWP8 271 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 RAB6CQ9H0N0 254 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 DPEP3Q9H4B8 488 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 SP110Q9HB58 689 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TMEM165Q9HC07 324 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CD320Q9NPF0 282 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CHRAC1Q9NRG0 131 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 SLC17A6Q9P2U8 582 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 COPG1Q9Y678 874 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 LAMA2P24043 3122 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 DNAJC25-GNG10A0A024R161 153 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PRSS51A0A1B0GVH4 220 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SYCE1LA8MT33 242 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF701M0R085 212 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF195O14628 629 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 S100BP04271 92 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 GPIP06744 558 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CHRNGP07510 517 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 TPH1P17752 444 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CCR1P32246 355 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms