RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	SEZ6L	Q9BYH1	1024 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	UPF3A	Q9H1J1	476 aa	Known RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF304	Q9HCX3	659 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	GIMAP4	Q9NUV9	329 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	NUP50	Q9UKX7	468 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	UBQLN1	Q9UMX0	589 aa	Known RBP	10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	PCDHGA8	Q9Y5G5	932 aa		10.8	□□□□□ -0.68
CHD2-223	ENST00000636306	HEATR9	A2RTY3	570 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	PI4K2B	G5E9Z4	385 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	TRIM24	O15164	1050 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	UPK1B	O75841	260 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	GNAO1	P09471	354 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	DARS	P14868	501 aa	Known RBP	10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	MX2	P20592	715 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	FGFR3	P22607	806 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	RPL10	P27635	214 aa	Known RBP	10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	RBL1	P28749	1068 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	SSTR3	P32745	418 aa	Predicted RBP	10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	PSEN2	P49810	448 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	RPL7A	P62424	266 aa	Known RBP	10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	TNK2	Q07912	1038 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	FOXD4	Q12950	439 aa	Predicted RBP	10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	C5orf22	Q49AR2	442 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC9B1	Q4ZJI4	515 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	LDLRAP1	Q5SW96	308 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	VWA5B1	Q5TIE3	1220 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC9A4	Q6AI14	798 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	LLGL2	Q6P1M3	1020 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	SYCE2	Q6PIF2	218 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	LCLAT1	Q6UWP7	414 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	BBS12	Q6ZW61	710 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	GLRX5	Q86SX6	157 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	SLCO6A1	Q86UG4	719 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	ZDHHC17	Q8IUH5	632 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	LURAP1L	Q8IV03	231 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	GALNT6	Q8NCL4	622 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC2A14	Q8TDB8	520 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	BRSK1	Q8TDC3	778 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	FIG4	Q92562	907 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	LPGAT1	Q92604	370 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	MCRS1	Q96EZ8	462 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	HEXIM2	Q96MH2	286 aa	Known RBP	10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	PPP1R16B	Q96T49	567 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	CHID1	Q9BWS9	393 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	CALN1	Q9BXU9	219 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	TRIM15	Q9C019	465 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	ELOVL4	Q9GZR5	314 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	GMIP	Q9P107	970 aa		10.79	□□□□□ -0.68
CHD2-223	ENST00000636306	CENPX	A8MT69	81 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	CXorf49	A8MYA2	514 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SLCO1B7	G3V0H7	640 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	BET1	O15155	118 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	RAD51B	O15315	384 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SEC24D	O94855	1032 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	NDST3	O95803	873 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	CKMT2	P17540	419 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	EIF2D	P41214	584 aa	Known RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	OR3A3	P47888	321 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	GABARAPL2	P60520	117 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC10A2	Q12908	348 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	AQP6	Q13520	282 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	BMPR2	Q13873	1038 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SKIV2L	Q15477	1246 aa	Known RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	KIZ	Q2M2Z5	673 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	AGAP6	Q5VW22	663 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	PRSS48	Q7RTY5	328 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	XYLT1	Q86Y38	959 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	CBR4	Q8N4T8	237 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	RHOXF1	Q8NHV9	184 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	JPH3	Q8WXH2	748 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC45A3	Q96JT2	553 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	AGAP4	Q96P64	663 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF717	Q9BY31	904 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	LHPP	Q9H008	270 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SDCBP2	Q9H190	292 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	POPDC2	Q9HBU9	364 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	NECTIN3	Q9NQS3	549 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SETD4	Q9NVD3	440 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	SYBU	Q9NX95	663 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	VTI1B	Q9UEU0	232 aa		10.78	□□□□□ -0.68
CHD2-223	ENST00000636306	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.78	□□□□□ -0.68
CHD2-223	ENST00000636306		M0QZ92	97 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ARHGEF15	O94989	841 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	KCNK2	O95069	426 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	HSPA4L	O95757	839 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	GSTM1	P09488	218 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	FCGR1A	P12314	374 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	GPD1	P21695	349 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	KCNA4	P22459	653 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	CES1	P23141	567 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	MSX2	P35548	267 aa	Predicted RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	POLR2I	P36954	125 aa	Known RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	DDOST	P39656	456 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	ALDH7A1	P49419	539 aa	Known RBP	10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	CLCNKB	P51801	687 aa		10.77	□□□□□ -0.68
CHD2-223	ENST00000636306	NDST1	P52848	882 aa		10.77	□□□□□ -0.68

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