RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	SOX4	Q06945	474 aa	Predicted RBP	14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	PLEKHG4	Q58EX7	1191 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	KYAT3	Q6YP21	454 aa	Known RBP	14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	ZNF621	Q6ZSS3	439 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	STK40	Q8N2I9	435 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	KLHDC9	Q8NEP7	349 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	KLK6	Q92876	244 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	ZNF556	Q9HAH1	456 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	MYH13	Q9UKX3	1938 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	TMEM114	B3SHH9	223 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	HLA-DPA1	P20036	260 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	GSS	P48637	474 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	RAB10	P61026	200 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	TBL3	Q12788	808 aa	Known RBP	14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	TP53BP2	Q13625	1128 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	TRMT10B	Q6PF06	316 aa	Known RBP	14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	CHST9	Q7L1S5	443 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	GPR156	Q8NFN8	814 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	ESAM	Q96AP7	390 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	TMEM209	Q96SK2	561 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	SELENON	Q9NZV5	590 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	POLG2	Q9UHN1	485 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	TAGLN3	Q9UI15	199 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	FBXW11	Q9UKB1	542 aa		14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	PAIP2B	Q9ULR5	123 aa	Known RBP	14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	COL2A1	P02458	1487 aa	Predicted RBP	14.34	□□□□□ -0.11
NEDD4L-238	ENST00000635997	OR2AG2	A6NM03	316 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	METTL18	O95568	372 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	CALB2	P22676	271 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	MPP1	Q00013	466 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	CRYBG2	Q8N1P7	616 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	GLMN	Q92990	594 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	LINGO1	Q96FE5	620 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	SIPA1	Q96FS4	1042 aa		14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	PIWIL1	Q96J94	861 aa	Known RBP	14.33	□□□□□ -0.11
NEDD4L-238	ENST00000635997	EME2	A4GXA9	379 aa	Predicted RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997		H0Y858	1186 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CREB1	P16220	341 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	ATP6V1B2	P21281	511 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	MAPK8	P45983	427 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	YBEY	P58557	167 aa	Predicted RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CHRNB3	Q05901	458 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	OTUD3	Q5T2D3	398 aa	Predicted RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	AGMO	Q6ZNB7	445 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	KY	Q8NBH2	561 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	SPOCK2	Q92563	424 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CLIP3	Q96DZ5	547 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	MYO19	Q96H55	970 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	PLEKHA8	Q96JA3	519 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CDRT15	Q96T59	188 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	IL12RB2	Q99665	862 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	RERGL	Q9H628	205 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	ABCB8	Q9NUT2	735 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	EPCAM	P16422	314 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	TNNI3	P19429	210 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	ZNF398	Q8TD17	642 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	ZNF483	Q8TF39	744 aa	Predicted RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	MRPL38	Q96DV4	380 aa	Known RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	SMG9	Q9H0W8	520 aa	Known RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	EBF3	Q9H4W6	596 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	SPACA6	W5XKT8	324 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	KANSL1L	A0AUZ9	987 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	MRAS	O14807	208 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	SLC31A1	O15431	190 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	FECH	P22830	423 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CAP1	Q01518	475 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CNTN1	Q12860	1018 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CDCA2	Q69YH5	1023 aa	Predicted RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	C10orf53	Q8N6V4	93 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CKAP2	Q8WWK9	683 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	FIG4	Q92562	907 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CEP19	Q96LK0	163 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	C1orf50	Q9BV19	199 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	IMP3	Q9NV31	184 aa	Known RBP	14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	NDUFAF1	Q9Y375	327 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	GVINP1	Q7Z2Y8	2422 aa		14.33	□□□□□ -0.12
NEDD4L-238	ENST00000635997	MARF1	Q9Y4F3	1742 aa	Known RBP	14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	AXIN1	O15169	862 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	IRAK2	O43187	625 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	SERPINI2	O75830	405 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CTSA	P10619	480 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	MLN	P12872	115 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	PTPN3	P26045	913 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	PEX5	P50542	639 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	RPL14	P50914	215 aa	Known RBP	14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	CLCN5	P51795	746 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	ITIH4	Q14624	930 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	PLA2G4E	Q3MJ16	856 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	EOGT	Q5NDL2	527 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	ANKRD33	Q7Z3H0	272 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	TRABD2A	Q86V40	505 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	C10orf107	Q8IVU9	208 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	DNAJC1	Q96KC8	554 aa	Known RBP	14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	SUSD3	Q96L08	255 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	SMO	Q99835	787 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	PBX4	Q9BYU1	374 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	OSBPL7	Q9BZF2	842 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	RXFP1	Q9HBX9	757 aa		14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	14.32	□□□□□ -0.12
NEDD4L-238	ENST00000635997	ASCC3	Q8N3C0	2202 aa	Known RBP	14.32	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms