RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 B4GALT3O60512 393 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 PRAMEF11O60813 436 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 RPP40O75818 363 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 SRP72O76094 671 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 GLP2RO95838 553 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 RECKO95980 971 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 EPOP01588 193 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 IGLV3-27P01718 113 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 C8BP07358 591 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ATXN1LP0C7T5 689 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 OGNP20774 298 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 CST5P28325 142 aaPredicted RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 CTGFP29279 349 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 DPP6P42658 865 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 OR1G1P47890 313 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 GPR15P49685 360 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ARSDP51689 593 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 KPNA1P52294 538 aaPredicted RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 CDKN2DP55273 166 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 STX1BP61266 288 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 HERVK_113P63132 956 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 MS4A2Q01362 244 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ROR2Q01974 943 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 RING1Q06587 406 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 TRAP1Q12931 704 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 ZNF235Q14590 738 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 DDR2Q16832 855 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 LIN52Q52LA3 116 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 CLLU1OSQ5K130 101 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 C10orf120Q5SQS8 335 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 ZNF678Q5SXM1 525 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 RAP1GAP2Q684P5 730 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 NAIF1Q69YI7 327 aaPredicted RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 REP15Q6BDI9 236 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 FBXL22Q6P050 247 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 UGT2A3Q6UWM9 527 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 SLC24A5Q71RS6 500 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ARPINQ7Z6K5 226 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 SPATA24Q86W54 205 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 TICAM1Q8IUC6 712 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 COLGALT2Q8IYK4 626 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 GALNT15Q8N3T1 639 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ZNF483Q8TF39 744 aaPredicted RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 ANKRD49Q8WVL7 239 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 PHF21BQ96EK2 531 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ZNF599Q96NL3 588 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 RPRD1AQ96P16 312 aaPredicted RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 GCNAQ96QF7 691 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 SEMA3CQ99985 751 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ERVK-6Q9BXR3 956 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 TRIM4Q9C037 500 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 ALG9Q9H6U8 611 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.08□□□□□ -1.12
GPC3-204ENST00000631057 CACNA2D2Q9NY47 1150 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.08□□□□□ -1.124e-7■■■■■ 34.4
GPC3-204ENST00000631057 NDUFA13Q9P0J0 144 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 MARCH4Q9P2E8 410 aaPredicted RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 ABT1Q9ULW3 272 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 TBC1D30Q9Y2I9 924 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 TRAF6Q9Y4K3 522 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 PCDHGA7Q9Y5G6 932 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 SLC12A8A0AV02 714 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CCDC189A1A4V9 331 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 BBIP1A8MTZ0 92 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 STX16-NPEPL1H3BU86 382 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 MRASO14807 208 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 SUPT7LO94864 414 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 STAMBPO95630 424 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CAPNS1P04632 268 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 GRK4P32298 578 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 ACADVLP49748 655 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 SUOXP51687 545 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 PLK1P53350 603 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 SH3BGRP55822 239 aaPredicted RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 C1QTNF8P60827 252 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 NOGQ13253 232 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 LRP8Q14114 963 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 TLR1Q15399 786 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CTXN3Q4LDR2 81 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 SAMD4BQ5PRF9 694 aaKnown RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 GPR158Q5T848 1215 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 RASIP1Q5U651 963 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CWF19L1Q69YN2 538 aaKnown RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 CCSAPQ6IQ19 270 aaPredicted RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 ISCA2Q86U28 154 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 CLYBLQ8N0X4 340 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 BBS5Q8N3I7 341 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 PGBD5Q8N414 524 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 RNF148Q8N7C7 305 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 PCYOX1LQ8NBM8 494 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 RHEBL1Q8TAI7 183 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 IGSF8Q969P0 613 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 C19orf60Q96EN9 201 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 SPATA16Q9BXB7 569 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 RETREG1Q9H6L5 497 aa8.07□□□□□ -1.12
GPC3-204ENST00000631057 COPS7BQ9H9Q2 264 aaPredicted RBP8.07□□□□□ -1.12
GPC3-204ENST00000631057 PIDD1Q9HB75 910 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms