RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 GREM2Q9H772 168 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 POLR1BQ9H9Y6 1135 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CYP3A43Q9HB55 503 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PANK4Q9NVE7 773 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 DNAJC17Q9NVM6 304 aaKnown RBP4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PKD2L2Q9NZM6 624 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 CLEC1BQ9P126 229 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 VPS51Q9UID3 782 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 GMEB2Q9UKD1 530 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 TSPAN16Q9UKR8 245 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 DLC1Q96QB1 1528 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 NPHP3Q7Z494 1330 aa4.9□□□□□ -1.63
SDCBP-213ENST00000630925 PARD3Q8TEW0 1356 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 A0A0A6YYC8 382 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 ERICH2A1L162 156 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 MBD3L4A6NDZ8 208 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 MBD3L3A6NE82 208 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 CFAP73A6NFT4 308 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SPATA31C2B4DYI2 1134 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 I3L1I5 382 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 J3QW42 95 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SLC30A4O14863 429 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 AURKAO14965 403 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SYN3O14994 580 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 LDLRAD4O15165 306 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 AKR7A2O43488 359 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 BUB1BO60566 1050 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 TAF5LO75529 589 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SCGB2A1O75556 95 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 ATP5HO75947 161 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SERPINA3P01011 423 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 IL1BP01584 269 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 FGBP02675 491 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 IQCF3P0C7M6 154 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 UMPSP11172 480 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SP100P23497 879 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 PRDX5P30044 214 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 CDC25AP30304 524 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 HOXA13P31271 388 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 CDKN1AP38936 164 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 FRKP42685 505 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 CRYBB1P53674 252 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 ATP2C1P98194 919 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SPP2Q13103 211 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 KLF10Q13118 480 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 GRAPQ13588 217 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 TMEM132BQ14DG7 1078 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 TAZQ16635 292 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 MTHFSDQ2M296 383 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 TAF1BQ53T94 588 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 PRRT3Q5FWE3 981 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 STRIP1Q5VSL9 837 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SLFN13Q68D06 897 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 KCTD11Q693B1 232 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 THOC7Q6I9Y2 204 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 TWF2Q6IBS0 349 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 WBP2NLQ6ICG8 309 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 OR6B2Q6IFH4 312 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 RINT1Q6NUQ1 792 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 USP50Q70EL3 339 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SLC24A5Q71RS6 500 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 HAUS6Q7Z4H7 955 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SPATA21Q7Z572 469 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 LRRC6Q86X45 466 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 FAM90A1Q86YD7 464 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SERPINA12Q8IW75 414 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 RHOT1Q8IXI2 618 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 RASGEF1AQ8N9B8 481 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 C17orf47Q8NEP4 570 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SNIP1Q8TAD8 396 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 WDR48Q8TAF3 677 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 GPT2Q8TD30 523 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 DDX54Q8TDD1 881 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 RAPGEF4Q8WZA2 1011 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 EEF2KMTQ96G04 330 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 MED15Q96RN5 788 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 PAFAH2Q99487 392 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 WDR83Q9BRX9 315 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF577Q9BSK1 485 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 MYL10Q9BUA6 226 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 BBS2Q9BXC9 721 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 CPEB1Q9BZB8 566 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 API5Q9BZZ5 524 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 XYLT2Q9H1B5 865 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 WDCPQ9H6R7 721 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 ZDHHC18Q9NUE0 388 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 GPRC5DQ9NZD1 345 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 NENFQ9UMX5 172 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 NSFL1CQ9UNZ2 370 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 PHF24Q9UPV7 400 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SLC22A14Q9Y267 594 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 GDAQ9Y2T3 454 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 SF3B6Q9Y3B4 125 aaKnown RBP4.89□□□□□ -1.63
SDCBP-213ENST00000630925 DCCP43146 1447 aa4.89□□□□□ -1.63
SDCBP-213ENST00000630925 C2orf71A6NGG8 1288 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FAM90A7PA6NKC0 464 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FAM90A22PA8MWA6 464 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FAM90A12PA8MX19 464 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FAM90A23PA8MXZ1 464 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 GOLGA6L19H0YKK7 550 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 437.6 ms