RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 KNTC1P50748 2209 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 TMEM202A6NGA9 273 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 FZD6O60353 706 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 MYCLP1P12525 358 aaPredicted RBP17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 LHCGRP22888 699 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 ETV3P41162 512 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 SLC1A1P43005 524 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 EPHB1P54762 984 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 TCEAL1Q15170 157 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 ODF2Q5BJF6 829 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 HSD11B1LQ7Z5J1 315 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 CBARPQ8N350 705 aaPredicted RBP17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 OR1E3Q8WZA6 343 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 MAK16Q9BXY0 300 aaKnown RBP17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 PHPT1Q9NRX4 125 aaPredicted RBP17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 DNPEPQ9ULA0 475 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 PADI4Q9UM07 663 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 GPR34Q9UPC5 381 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 LHX6Q9UPM6 363 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 PCDHB1Q9Y5F3 818 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 SHROOM3Q8TF72 1996 aa17.2■□□□□ 0.34
SPTAN1-214ENST00000628614 ACACAQ13085 2346 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 CSO75390 466 aaKnown RBP17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 TCEA3O75764 348 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 KRT1P04264 644 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 HLA-DQB2P05538 268 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 PDHA1P08559 390 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 ZFXP17010 805 aaPredicted RBP17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 ZNF30P17039 623 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 CTPS1P17812 591 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 TGM2P21980 687 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 TEAD1P28347 426 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 DSC2Q02487 901 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 PPIDQ08752 370 aaKnown RBP17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 SLC10A2Q12908 348 aaPredicted RBP17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 TCEA2Q15560 299 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 PERM1Q5SV97 790 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 SLC9A4Q6AI14 798 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 TSPAN33Q86UF1 283 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 HEATR4Q86WZ0 1026 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 PELI3Q8N2H9 469 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 PLD5Q8N7P1 536 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 KYQ8NBH2 561 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 OR6C4Q8NGE1 309 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 GRAMD1AQ96CP6 724 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 LGR4Q9BXB1 951 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 TDRD1Q9BXT4 1180 aaKnown RBP17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 DDX56Q9NY93 547 aaKnown RBP17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 GULP1Q9UBP9 304 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 HEY1Q9Y5J3 304 aa17.19■□□□□ 0.34
SPTAN1-214ENST00000628614 LRP4O75096 1905 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 A0A087WV48 116 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 A0A0J9YYE9 177 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 PRSS38A1L453 326 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 GOLGA6CA6NDK9 693 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 GOLGA6BA6NDN3 693 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 C3orf70A6NLC5 250 aaPredicted RBP17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 APOL1O14791 398 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 SPOPO43791 374 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 BRINP1O60477 761 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 TRBC1P01850 177 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 GOLGA6DP0CG33 693 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 ACTN2P35609 894 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 RPL26P61254 145 aaKnown RBP17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 LRRC66Q68CR7 880 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 KCTD16Q68DU8 428 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 RAET1GQ6H3X3 334 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 RBM44Q6ZP01 1051 aaKnown RBP17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 NYAP1Q6ZVC0 841 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 Q6ZVL8 140 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 TAF8Q7Z7C8 310 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 RHOT1Q8IXI2 618 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 ARRDC2Q8TBH0 407 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 CCDC3Q9BQI4 270 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 TEX101Q9BY14 249 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 MRPL40Q9NQ50 206 aaKnown RBP17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 GOLGA6AQ9NYA3 693 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 MOSPD1Q9UJG1 213 aa17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 RPL26L1Q9UNX3 145 aaKnown RBP17.18■□□□□ 0.34
SPTAN1-214ENST00000628614 MYLKQ15746 1914 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 FAM208BQ5VWN6 2430 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 CAPN8A6NHC0 703 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 KCNK1O00180 336 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 USP12O75317 370 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 JCHAINP01591 159 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 IFI35P80217 286 aaPredicted RBP17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 CDK3Q00526 305 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 DPTQ07507 201 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 PDK1Q15118 436 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 ISXQ2M1V0 245 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 C19orf48Q6RUI8 117 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 CRTC1Q6UUV9 634 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 TECPR1Q7Z6L1 1165 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 LSMEM2Q8N112 164 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 TC2NQ8N9U0 490 aa17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 SNIP1Q8TAD8 396 aaKnown RBP17.17■□□□□ 0.34
SPTAN1-214ENST00000628614 LRRN4Q8WUT4 740 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms