RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CNDP1Q96KN2 507 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 CORO1BQ9BR76 489 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 SLC46A2Q9BY10 475 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 COG4Q9H9E3 785 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 PRKAG2Q9UGJ0 569 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 BAIAP2L1Q9UHR4 511 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 FCF1Q9Y324 198 aaKnown RBP22.07■■□□□ 1.12
PNKP-220ENST00000627232 F8W8V4 182 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 MATN2O00339 956 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 PENKP01210 267 aaPredicted RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 MAPK8P45983 427 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 PLK1P53350 603 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 EPHA5P54756 1037 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 ERVFC1P60507 584 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 RPL26P61254 145 aaKnown RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 USP4Q13107 963 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 TMEM240Q5SV17 173 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 PSRC1Q6PGN9 363 aaPredicted RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 SLC22A9Q8IVM8 553 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 APCDD1Q8J025 514 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 LSMEM2Q8N112 164 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 MRPL43Q8N983 215 aaKnown RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 BADQ92934 168 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 POMKQ9H5K3 350 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.06■■□□□ 1.12
PNKP-220ENST00000627232 NCKIPSDQ9NZQ3 722 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 H7C0S8 307 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 PFDN6O15212 129 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 HDAC3O15379 428 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 CCL16O15467 120 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 GYG2O15488 501 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 DIAPH2O60879 1101 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 ENO1P06733 434 aaKnown RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 CHRNGP07510 517 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 MPSTP25325 297 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 TMEM207Q6UWW9 146 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 RINLQ6ZS11 566 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 PHOSPHO2Q8TCD6 241 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 ANKRD49Q8WVL7 239 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 MIPEPQ99797 713 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 C19orf43Q9BQ61 176 aa22.06■■□□□ 1.12
PNKP-220ENST00000627232 CADM1Q9BY67 442 aaKnown RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 CXXC1Q9P0U4 656 aaPredicted RBP22.06■■□□□ 1.12
PNKP-220ENST00000627232 SOBPA7XYQ1 873 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 SPECC1L-ADORA2AF8WAN1 911 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 STX7O15400 261 aaKnown RBP22.05■■□□□ 1.12
PNKP-220ENST00000627232 GSC2O15499 205 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 CYBBP04839 570 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 CTNNB1P35222 781 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 ABL2P42684 1182 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 TIAL1Q01085 375 aaKnown RBP eCLIP22.05■■□□□ 1.12
PNKP-220ENST00000627232 LMAN2Q12907 356 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 SEL1L3Q68CR1 1132 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 TRIM67Q6ZTA4 783 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 TEX9Q8N6V9 391 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 PNPLA1Q8N8W4 532 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 SLC22A17Q8WUG5 538 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 LPGAT1Q92604 370 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 MAGEE1Q9HCI5 957 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 ABCB8Q9NUT2 735 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 TAS2R1Q9NYW7 299 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 RWDD3Q9Y3V2 267 aa22.05■■□□□ 1.12
PNKP-220ENST00000627232 ALPK3Q96L96 1907 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 A8MT66 165 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 PRR5-ARHGAP8B1AHC4 643 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 CHUKO15111 745 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 NDUFS3O75489 264 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 IPO13O94829 963 aaKnown RBP22.04■■□□□ 1.12
PNKP-220ENST00000627232 PGLSO95336 258 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 MT-CO1P00395 513 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 GJA1P17302 382 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 TFEBP19484 476 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 SLC8A1P32418 973 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 CLCN4P51793 760 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 ARHGAP8P85298 464 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 PLEKHG6Q3KR16 790 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 ATXN7L2Q5T6C5 722 aaPredicted RBP22.04■■□□□ 1.12
PNKP-220ENST00000627232 GPR158Q5T848 1215 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 ARMC12Q5T9G4 340 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 PLPP4Q5VZY2 271 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 TMPRSS6Q8IU80 811 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 FAM13CQ8NE31 585 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 SGF29Q96ES7 293 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 MYO19Q96H55 970 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 UNKQ9C0B0 810 aaKnown RBP22.04■■□□□ 1.12
PNKP-220ENST00000627232 MMADHCQ9H3L0 296 aaPredicted RBP22.04■■□□□ 1.12
PNKP-220ENST00000627232 POLR3BQ9NW08 1133 aaPredicted RBP22.04■■□□□ 1.12
PNKP-220ENST00000627232 PCDH10Q9P2E7 1040 aa22.04■■□□□ 1.12
PNKP-220ENST00000627232 A8MUI8 341 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 NRG2O14511 850 aaPredicted RBP22.03■■□□□ 1.12
PNKP-220ENST00000627232 SLC4A1P02730 911 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 CD1DP15813 335 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 PTPN2P17706 415 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 CD9P21926 228 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 TTPAP49638 278 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 EPHB1P54762 984 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 UBE3AQ05086 875 aa22.03■■□□□ 1.12
PNKP-220ENST00000627232 UBAP2LQ14157 1087 aaKnown RBP22.03■■□□□ 1.12
PNKP-220ENST00000627232 WASHC2DQ5SRD0 308 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms