RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 GKP32189 559 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC8A1P32418 973 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 HMGCLP35914 325 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 OPRD1P41143 372 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC1A2P43004 574 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 TNFRSF4P43489 277 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 CD151P48509 253 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 ARSDP51689 593 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 CLCN5P51795 746 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 GNGT1P63211 74 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 IL9RQ01113 521 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 GUCY1A3Q02108 690 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SMAD1Q15797 465 aaKnown RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 PTPRNQ16849 979 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 HNRNPA1L2Q32P51 320 aaKnown RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 AARS2Q5JTZ9 985 aaKnown RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 FSTL4Q6MZW2 842 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 TPRG1Q6ZUI0 275 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SH2D5Q6ZV89 423 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 ZC3HC1Q86WB0 502 aaKnown RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 CILP2Q8IUL8 1156 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 DCLK2Q8N568 766 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 ANKRD42Q8N9B4 389 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 BANPQ8N9N5 519 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 ST13P5Q8NFI4 369 aaPredicted RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 OR4K2Q8NGD2 314 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 OR13C4Q8NGS5 318 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 OR4L1Q8NH43 312 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 MDM1Q8TC05 714 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 DYDC1Q8WWB3 177 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 ISL2Q96A47 359 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SCRN2Q96FV2 425 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 CDKN2AIPNLQ96HQ2 116 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 VPS39Q96JC1 886 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SERAC1Q96JX3 654 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 TBATAQ96M53 351 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 MCCC1Q96RQ3 725 aaPredicted RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 TCF12Q99081 682 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 GPR22Q99680 433 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 MCMBPQ9BTE3 642 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 IQCGQ9H095 443 aaKnown RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 BRD9Q9H8M2 597 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 ZFYVE1Q9HBF4 777 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 TRPV5Q9NQA5 729 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 CATSPERZQ9NTU4 200 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 GTSE1Q9NYZ3 720 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC17A6Q9P2U8 582 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 DKK3Q9UBP4 350 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SUN2Q9UH99 717 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 GGT7Q9UJ14 662 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 CORO1CQ9ULV4 474 aaPredicted RBP7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 VPS9D1Q9Y2B5 631 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 KCTD3Q9Y597 815 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 SHROOM3Q8TF72 1996 aa7.55□□□□□ -1.2
PTP4A1-206ENST00000627002 VCANP13611 3396 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 NUP205Q92621 2012 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 C1orf232A0A0U1RR37 186 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TSPAN11A1L157 253 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CCDC162PA2VCL2 907 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 H3BQ06 376 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 GOLGA8RI6L899 631 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TPP1O14773 563 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 AURKAO14965 403 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CD3EAPO15446 510 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 BUD23O43709 281 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 SPAG7O75391 227 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 LEFTY1O75610 366 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC4A1P02730 911 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 PRNPP04156 253 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 UGT2B4P06133 528 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 GSTA1P08263 222 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 ALPIP09923 528 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CYP2A6P11509 494 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 HNRNPLP14866 589 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 ZNF30P17039 623 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CTPS1P17812 591 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 XPAP23025 273 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CRABP2P29373 138 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 PMLP29590 882 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TYK2P29597 1187 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 LSP1P33241 339 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 HNF1BP35680 557 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 PPARGP37231 505 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 MAGEA12P43365 314 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 LEPRP48357 1165 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CCT5P48643 541 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 NEK3P51956 506 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 PTPN5P54829 565 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TMPRSS15P98073 1019 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 POU4F1Q01851 419 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CTBP1Q13363 440 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 ELAVL3Q14576 367 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 ZNF234Q14588 700 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 SKIV2LQ15477 1246 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TERF2Q15554 542 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 INSCQ1MX18 579 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 FASTKD1Q53R41 847 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 ZNF805Q5CZA5 627 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 RNF187Q5TA31 235 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms