RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SLC13A5Q86YT5 568 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 ZNF567Q8N184 647 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 SDR16C5Q8N3Y7 309 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 DTD2Q96FN9 168 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 SPATA13Q96N96 652 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 RBM15Q96T37 977 aaKnown RBP eCLIP14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 NAP1L3Q99457 506 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 WDR26Q9H7D7 661 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 PKD2L2Q9NZM6 624 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 NCKIPSDQ9NZQ3 722 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 FEZ2Q9UHY8 353 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 DOCK9Q9BZ29 2069 aa14.02□□□□□ -0.17
SNRPA1-216ENST00000626000 TMEM131Q92545 1883 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 CABIN1Q9Y6J0 2220 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 C5orf60A6NFR6 353 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 KCNK5O95279 499 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 CSF2P04141 144 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 PDHA1P08559 390 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 CDK4P11802 303 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 ITIH2P19823 946 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 NFKB1P19838 968 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 KIAA1024LP59773 190 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 NFATC4Q14934 902 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 PPM1JQ5JR12 505 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 LRRC66Q68CR7 880 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 CBARPQ8N350 705 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 SLC35B2Q8TB61 432 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 SAP25Q8TEE9 199 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 SETD7Q8WTS6 366 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 NSMCE3Q96MG7 304 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 TRIB3Q96RU7 358 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 DUSP23Q9BVJ7 150 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 CEP41Q9BYV8 373 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 IL21RQ9HBE5 538 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 PHPT1Q9NRX4 125 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 CSNK1G3Q9Y6M4 447 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 LRRK1Q38SD2 2015 aa14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 COL5A1P20908 1838 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-216ENST00000626000 C1orf232A0A0U1RR37 186 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 DCDC2BA2VCK2 349 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 TNFRSF10CO14798 259 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PSMD3O43242 534 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PPFIA2O75334 1257 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PMPCBO75439 489 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 TRIM16O95361 564 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PRLP01236 227 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PRKCGP05129 697 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 FGF1P05230 155 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 CTPS1P17812 591 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 LHCGRP22888 699 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 TRIM23P36406 574 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 STC1P52823 247 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 WNT3AP56704 352 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 DCDC1P59894 354 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PPARDQ03181 441 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PEX6Q13608 980 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 FZD2Q14332 565 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 INPP5AQ14642 412 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PCSK7Q16549 785 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 QPCTQ16769 361 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 ANKRD20A2Q5SQ80 823 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 ANKRD20A1Q5TYW2 823 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 ANKRD20A3Q5VUR7 823 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 DRICH1Q6PGQ1 229 aaPredicted RBP14□□□□□ -0.17
SNRPA1-216ENST00000626000 CRTC1Q6UUV9 634 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 C4orf22Q6V702 233 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 SLC22A18ASQ8N1D0 253 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 FSTL5Q8N475 847 aaPredicted RBP14□□□□□ -0.17
SNRPA1-216ENST00000626000 OR2I1PQ8NGU4 316 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 RHBDD1Q8TEB9 315 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 LRRN4Q8WUT4 740 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PBKQ96KB5 322 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 WDR92Q96MX6 357 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 APOOQ9BUR5 198 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 SLC13A1Q9BZW2 595 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 ZFYVE1Q9HBF4 777 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 DNAJC28Q9NX36 388 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 NFKBIL1Q9UBC1 381 aaPredicted RBP14□□□□□ -0.17
SNRPA1-216ENST00000626000 SPASTQ9UBP0 616 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 PCOLCE2Q9UKZ9 415 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 CA5BQ9Y2D0 317 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 COQ6Q9Y2Z9 468 aa14□□□□□ -0.17
SNRPA1-216ENST00000626000 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 LOC285095A0A1B0GVY8 99 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 ERI2A8K979 691 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 SH3BP5O60239 455 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 GCATO75600 419 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 RASGRP1O95267 797 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 PCCBP05166 539 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 ALPIP09923 528 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 MYCLP1P12525 358 aaPredicted RBP13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 CD68P34810 354 aaPredicted RBP13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 PDE1BQ01064 536 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 TRIP6Q15654 476 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 PARP6Q2NL67 630 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 PDPK2PQ6A1A2 396 aa13.99□□□□□ -0.17
SNRPA1-216ENST00000626000 PSAPL1Q6NUJ1 521 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms