RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 SLC7A6OSQ96CW6 309 aaPredicted RBP13.24□□□□□ -0.29
C3orf56-201ENST00000624688 MRPL57Q9BQC6 102 aaKnown RBP13.24□□□□□ -0.29
C3orf56-201ENST00000624688 SIKE1Q9BRV8 207 aa13.24□□□□□ -0.29
C3orf56-201ENST00000624688 NMUR2Q9GZQ4 415 aa13.24□□□□□ -0.29
C3orf56-201ENST00000624688 MRPL46Q9H2W6 279 aaKnown RBP13.24□□□□□ -0.29
C3orf56-201ENST00000624688 GPAMQ9HCL2 828 aa13.24□□□□□ -0.29
C3orf56-201ENST00000624688 ACSS2Q9NR19 701 aa13.24□□□□□ -0.29
C3orf56-201ENST00000624688 SAR1AQ9NR31 198 aa13.24□□□□□ -0.29
C3orf56-201ENST00000624688 ARL8BQ9NVJ2 186 aa13.24□□□□□ -0.29
C3orf56-201ENST00000624688 EVLQ9UI08 416 aaPredicted RBP13.24□□□□□ -0.29
C3orf56-201ENST00000624688 PCDHB9Q9Y5E1 797 aa13.24□□□□□ -0.29
C3orf56-201ENST00000624688 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 ATP5HO75947 161 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 PENKP01210 267 aaPredicted RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 SLC4A1P02730 911 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 CYBBP04839 570 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 LTA4HP09960 611 aaKnown RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 CCDC166P0CW27 439 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 NQO1P15559 274 aaKnown RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 HLA-FP30511 346 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 CTSOP43234 321 aaPredicted RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 GRIA4P48058 902 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 CSNK1DP48730 415 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 CDKN1CP49918 316 aaPredicted RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 PRKAA2P54646 552 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 ZBTB16Q05516 673 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 ILF2Q12905 390 aaKnown RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 FUT11Q495W5 492 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 ARHGAP15Q53QZ3 475 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 PITRM1Q5JRX3 1037 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 DGKKQ5KSL6 1271 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 FAM109BQ6ICB4 259 aaPredicted RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 SDCCAG8Q86SQ7 713 aaPredicted RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 WDR75Q8IWA0 830 aaKnown RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 ZNF781Q8N8C0 355 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 EID2BQ96D98 161 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 MYO19Q96H55 970 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 ZSWIM3Q96MP5 696 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 TMEM237Q96Q45 408 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 INTS10Q9NVR2 710 aaKnown RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 FKBPLQ9UIM3 349 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 CORO1CQ9ULV4 474 aaPredicted RBP13.23□□□□□ -0.29
C3orf56-201ENST00000624688 HCFC2Q9Y5Z7 792 aa13.23□□□□□ -0.29
C3orf56-201ENST00000624688 SOBPA7XYQ1 873 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 PER2O15055 1255 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 HTRA2O43464 458 aaPredicted RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 PIGNO95427 931 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 HSPA4LO95757 839 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 RB1P06400 928 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 GKP32189 559 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 CCR10P46092 362 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 SUOXP51687 545 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ELF3P78545 371 aaPredicted RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 PFKPQ01813 784 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 PEX6Q13608 980 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ZNF77Q15935 545 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 FAM83EQ2M2I3 478 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ARMC12Q5T9G4 340 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 PACS2Q86VP3 889 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 TXNDC5Q8NBS9 432 aaKnown RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 SREK1Q8WXA9 508 aaKnown RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 LPGAT1Q92604 370 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ZNF707Q96C28 371 aaPredicted RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 PTCD3Q96EY7 689 aaKnown RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 AARSD1Q9BTE6 412 aaKnown RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 DRC3Q9H069 523 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 TNKS2Q9H2K2 1166 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 LINC00597Q9H2U6 94 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 TLE6Q9H808 572 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 MAGEE1Q9HCI5 957 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 BPIFA1Q9NP55 256 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 DNAJC28Q9NX36 388 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 HACD3Q9P035 362 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 MED16Q9Y2X0 877 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 CXorf51AA0A1B0GTR3 108 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 CAPN14A8MX76 684 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 H7C0S8 307 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 CHRNGP07510 517 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ALPIP09923 528 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 SRCP12931 536 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 HOXB8P17481 243 aaPredicted RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 CTPS1P17812 591 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 SLC26A3P40879 764 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 STK19P49842 368 aaPredicted RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 IDH3AP50213 366 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 KPNA2P52292 529 aaKnown RBP13.22□□□□□ -0.29
C3orf56-201ENST00000624688 NAGLUP54802 743 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 USP4Q13107 963 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 RCN2Q14257 317 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 KRT72Q14CN4 511 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 ACAP2Q15057 778 aa13.22□□□□□ -0.29
C3orf56-201ENST00000624688 PSAPL1Q6NUJ1 521 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms