RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 WDR26Q9H7D7 661 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 COQ6Q9Y2Z9 468 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 HEY1Q9Y5J3 304 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 KIF26BQ2KJY2 2108 aa12.46□□□□□ -0.42
LINC00963-217ENST00000624009 ITPR1Q14643 2758 aa12.46□□□□□ -0.42
LINC00963-217ENST00000624009 TTC24A2A3L6 582 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 CCDC66A2RUB6 948 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 RGSL1A5PLK6 1076 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 NPIPB15A6NHN6 443 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 PRLP01236 227 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 MYCLP1P12525 358 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 SPINK2P20155 84 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 LHCGRP22888 699 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 CTNNA1P35221 906 aaKnown RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 PTPN7P35236 360 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 VAV2P52735 878 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 SRP54P61011 504 aaKnown RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 DAB2P98082 770 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 DSC2Q02487 901 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 ITKQ08881 620 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 DNAJC3Q13217 504 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 ACOX1Q15067 660 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 PRKD1Q15139 912 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 TEX44Q53QW1 395 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 SPOCD1Q6ZMY3 1216 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 TECPR1Q7Z6L1 1165 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 RFX6Q8HWS3 928 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 TMEM139Q8IV31 216 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 NRSN1Q8IZ57 195 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 SCG3Q8WXD2 468 aaKnown RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 RNF25Q96BH1 459 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 TADA1Q96BN2 335 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 GRAMD1AQ96CP6 724 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 IMP4Q96G21 291 aaKnown RBP12.45□□□□□ -0.42
LINC00963-217ENST00000624009 APOLD1Q96LR9 279 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 RBM15Q96T37 977 aaKnown RBP eCLIP12.45□□□□□ -0.428e-6■■■■■ 30.1
LINC00963-217ENST00000624009 LRRC61Q9BV99 259 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 TEX101Q9BY14 249 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 ADGRE3Q9BY15 652 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 CDH19Q9H159 772 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 SLC25A51Q9H1U9 297 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 PCDH9Q9HC56 1237 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 KLQ9UEF7 1012 aa12.45□□□□□ -0.42
LINC00963-217ENST00000624009 SCN8AQ9UQD0 1980 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 hCG_1818297A0A087WSY0 165 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 LY6G6EA0A0G2JKS1 128 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 HACD1B0YJ81 288 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 APOC4-APOC2K7ER74 178 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 KCNK1O00180 336 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 CST8O60676 142 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 MAP3K6O95382 1288 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 JCHAINP01591 159 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 APOC2P02655 101 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 CAPNS1P04632 268 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 PRKCGP05129 697 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 ANXA6P08133 673 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 MMP2P08253 660 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 PDHA1P08559 390 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 C1QTNF9P0C862 333 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 RPIAP49247 311 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 EPHB1P54762 984 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 NIPAL4Q0D2K0 466 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 AP1B1Q10567 949 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 ZBTB17Q13105 803 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 XRCC4Q13426 336 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 CAMK2BQ13554 666 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 IHHQ14623 411 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 ST3GAL2Q16842 350 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 ALG11Q2TAA5 492 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 ZNF542PQ5EBM4 170 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 PRRT3Q5FWE3 981 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 FAXCQ5TGI0 409 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 CRTC1Q6UUV9 634 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 DHRS13Q6UX07 377 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 BBS12Q6ZW61 710 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 NT5DC3Q86UY8 548 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 GKN2Q86XP6 184 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 CNTD1Q8N815 330 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 LRRC57Q8N9N7 239 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 OR6C4Q8NGE1 309 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 OR56A4Q8NGH8 313 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 WDR48Q8TAF3 677 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 KIAA1524Q8TCG1 905 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 LMX1AQ8TE12 382 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 TFB1MQ8WVM0 346 aaKnown RBP12.44□□□□□ -0.42
LINC00963-217ENST00000624009 P3H4Q92791 437 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 NAT6Q93015 286 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 FUBP1Q96AE4 644 aaKnown RBP12.44□□□□□ -0.42
LINC00963-217ENST00000624009 PHPT1Q9NRX4 125 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-217ENST00000624009 PNMA8BQ9ULN7 279 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-217ENST00000624009 REXO2Q9Y3B8 237 aaKnown RBP12.44□□□□□ -0.42
LINC00963-217ENST00000624009 PCDHA3Q9Y5H8 950 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 U3KQA8 63 aa12.44□□□□□ -0.42
LINC00963-217ENST00000624009 EME2A4GXA9 379 aaPredicted RBP12.43□□□□□ -0.42
LINC00963-217ENST00000624009 ANKRD66B4E2M5 251 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms