RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NDNFQ8TB73 568 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 PHF10Q8WUB8 498 aaKnown RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 HSFY1Q96LI6 401 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 ACO2Q99798 780 aaKnown RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 UNC93B1Q9H1C4 597 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 TOR3AQ9H497 397 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 ERVMER34-1Q9H9K5 563 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 PNPLA8Q9NP80 782 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 RNF181Q9P0P0 153 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 SAE1Q9UBE0 346 aaPredicted RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 KIAA1551Q9HCM1 1747 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 H0Y626 953 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 PRKCBP05771 671 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 RPS9P46781 194 aaKnown RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 PSMC5P62195 406 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 PPP3CAQ08209 521 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 CTF1Q16619 201 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 STXBP5Q5T5C0 1151 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 CCNJQ5T5M9 372 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 ARHGEF16Q5VV41 709 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 FAM180BQ6P0A1 224 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 RSBN1LQ6PCB5 846 aaPredicted RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 TLK2Q86UE8 772 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 THNSL1Q8IYQ7 743 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 IPMKQ8NFU5 416 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 OR13J1Q8NGT2 312 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 OR2T34Q8NGX1 318 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 ACTL9Q8TC94 416 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 MAPK15Q8TD08 544 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 SHC3Q92529 594 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 BIRC7Q96CA5 298 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 TOE1Q96GM8 510 aaKnown RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 BTN2A3PQ96KV6 586 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 RIPOR3Q96MK2 946 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 KREMEN1Q96MU8 473 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 C11orf70Q9BRQ4 267 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 C2orf40Q9H1Z8 148 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 BCAS3Q9H6U6 928 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 ACOXLQ9NUZ1 547 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 FBXO40Q9UH90 709 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 DCDC2Q9UHG0 476 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 RPH3AQ9Y2J0 694 aaPredicted RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 PCDHB12Q9Y5F1 795 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 OR5K4A6NMS3 321 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 WDR64B1ANS9 1081 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 RASAL1O95294 804 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 CCNE2O96020 404 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 CSH1P0DML2 217 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 CSH2P0DML3 217 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 BMP1P13497 986 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 GTF2E2P29084 291 aaKnown RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 ZNF33BQ06732 778 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 AP3B2Q13367 1082 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 KCNT1Q5JUK3 1230 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 PLBD1Q6P4A8 553 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 DPY19L3Q6ZPD9 716 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 FAM178BQ8IXR5 827 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 SLC35B2Q8TB61 432 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 URGCPQ8TCY9 931 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 ACSF2Q96CM8 615 aaPredicted RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 FAF2Q96CS3 445 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 DUS3LQ96G46 650 aaKnown RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 CENPNQ96H22 339 aaPredicted RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 OSBPL2Q9H1P3 480 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.93□□□□□ -1.14
VPS11-209ENST00000622309 ZNRF3Q9ULT6 936 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 ARFGEF1Q9Y6D6 1849 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 hCG_1818297A0A087WSY0 165 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 USP17L5A8MUK1 530 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 IL7P13232 177 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 RAC2P15153 192 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 CYP2A7P20853 494 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 CBLP22681 906 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 CYP2C18P33260 490 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ATP6V1E1P36543 226 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ATP5OP48047 213 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 VBP1P61758 197 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 GABREP78334 506 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ACAP2Q15057 778 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 MAPRE2Q15555 327 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 CYBRD1Q53TN4 286 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 GARNL3Q5VVW2 1013 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 SEL1L3Q68CR1 1132 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 GDPD3Q7L5L3 318 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 TRMT1LQ7Z2T5 733 aaKnown RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 R3HCC1LQ7Z5L2 792 aaKnown RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 METTL3Q86U44 580 aaKnown RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 EPHX4Q8IUS5 362 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 METTL4Q8N3J2 472 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 AADATQ8N5Z0 425 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 FAM83FQ8NEG4 500 aaPredicted RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 TMEM80Q96HE8 168 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ST6GAL2Q96JF0 529 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ILKAPQ9H0C8 392 aaPredicted RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 PCIF1Q9H4Z3 704 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 NECTIN3Q9NQS3 549 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 GGA3Q9NZ52 723 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 GLTPQ9NZD2 209 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms