RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PCDHB5Q9Y5E4 795 aa9.63□□□□□ -0.87
IGHV3-54-201ENST00000622166 PRORSD1PA6NEY8 169 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 CLGNO14967 610 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 VILLO15195 856 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 CD3EAPO15446 510 aaKnown RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 ADAMTS4O75173 837 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 VPS4BO75351 444 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 SUPT7LO94864 414 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 CDK14O94921 469 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 RTN3O95197 1032 aaPredicted RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 MATN4O95460 622 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 GLP2RO95838 553 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 EOMESO95936 686 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 CLPTM1O96005 669 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 GOT2P00505 430 aaKnown RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 ALDOCP09972 364 aaKnown RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR4Q2P0C623 313 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 HSPA8P11142 646 aaKnown RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 MAXP61244 160 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 STX1BP61266 288 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 FAM189BP81408 668 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 RING1Q06587 406 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 IKBKEQ14164 716 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 TYSND1Q2T9J0 566 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 C5orf22Q49AR2 442 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 COQ5Q5HYK3 327 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 C6orf10Q5SRN2 563 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 GPR158Q5T848 1215 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 MFSD14CQ5VZR4 134 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 AP1ARQ63HQ0 302 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 KANK2Q63ZY3 851 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 ALG1LQ6GMV1 187 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 MRNIPQ6NTE8 343 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 FBXL22Q6P050 247 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 RPS27LQ71UM5 84 aaKnown RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 RAB44Q7Z6P3 723 aaPredicted RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 TFAP2DQ7Z6R9 452 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 SATL1Q86VE3 508 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 RASAL3Q86YV0 1011 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 PHYKPLQ8IUZ5 450 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 PCYOX1LQ8NBM8 494 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 FAM156AQ8NDB6 213 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR6P1Q8NGX9 317 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 TSPEARQ8WU66 669 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 PSMG2Q969U7 264 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 PBXIP1Q96AQ6 731 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 PHF21BQ96EK2 531 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 C19orf60Q96EN9 201 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 DTNBP1Q96EV8 351 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 TBATAQ96M53 351 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 ATOH8Q96SQ7 321 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 HOPXQ9BPY8 73 aaPredicted RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 AARSD1Q9BTE6 412 aaKnown RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 EFHD1Q9BUP0 239 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 OSBPL11Q9BXB4 747 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 COQ10BQ9H8M1 238 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 ARMC1Q9NVT9 282 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 POLR3BQ9NW08 1133 aaPredicted RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 ABI2Q9NYB9 513 aaPredicted RBP9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 PTTG2Q9NZH5 202 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 ABCD2Q9UBJ2 740 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 FIS1Q9Y3D6 152 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 KCTD3Q9Y597 815 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 TLL2Q9Y6L7 1015 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 CHD5Q8TDI0 1954 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 GBF1Q92538 1859 aa9.62□□□□□ -0.87
IGHV3-54-201ENST00000622166 GREB1Q4ZG55 1949 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 CCDC162PA2VCL2 907 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 C7orf72A4D263 438 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 ANKRD33BA6NCL7 494 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR51F1A6NGY5 319 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 AQP12BA6NM10 295 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 FAM155AB1AL88 458 aaPredicted RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 F8W810 466 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 AZIN1O14977 448 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 SYN3O14994 580 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 B4GALT3O60512 393 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 RAMP2O60895 175 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 NDST3O95803 873 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 BMP2P12643 396 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 HSD17B1P14061 328 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 ARSAP15289 507 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 HDCP19113 662 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 YWHAQP27348 245 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 GPR15P49685 360 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 PLK1P53350 603 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 NR1H2P55055 460 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 FOXM1Q08050 763 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 EFEMP1Q12805 493 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 GRIK2Q13002 908 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 MRPL58Q14197 206 aaKnown RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 POLD3Q15054 466 aaPredicted RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 SLC5A9Q2M3M2 681 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 C6orf52Q5T4I8 152 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 RAP1GAP2Q684P5 730 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 CLEC6AQ6EIG7 209 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 CCSAPQ6IQ19 270 aaPredicted RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 HMBOX1Q6NT76 420 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 PPP4R4Q6NUP7 873 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms