RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TRIM38O00635 465 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 FBP2O00757 339 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 TRIM24O15164 1050 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 UBDO15205 165 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 DENRO43583 198 aaKnown RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 TLR5O60602 858 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 ENO3P13929 434 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 ZNF140P52738 457 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 PLK1P53350 603 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 PKNOX1P55347 436 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 MED21Q13503 144 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 ADGRE1Q14246 886 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 ZNF235Q14590 738 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 PPP1R3AQ16821 1122 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 LRRC36Q1X8D7 754 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 RNF220Q5VTB9 566 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 GK5Q6ZS86 529 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 FAM43BQ6ZT52 329 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 ZNF354CQ86Y25 554 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 BHLHE22Q8NFJ8 381 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 PHF21BQ96EK2 531 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 PSKH2Q96QS6 385 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 CDK5RAP1Q96SZ6 601 aaKnown RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 UNC93B1Q9H1C4 597 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 MRPL40Q9NQ50 206 aaKnown RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 PACSIN3Q9UKS6 424 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 MTF2Q9Y483 593 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 CCDC189A1A4V9 331 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 STX16-NPEPL1H3BU86 382 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 NDST3O95803 873 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 FESP07332 822 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 C8BP07358 591 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 SERPINF2P08697 491 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 MTHFD2P13995 350 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 CLCN2P51788 898 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 PSME3P61289 254 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 FASTKQ14296 549 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 RPS27LQ71UM5 84 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 CRIPAKQ8N1N5 446 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 OR4L1Q8NH43 312 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 AARSD1Q9BTE6 412 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 TFB2MQ9H5Q4 396 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 CATSPERZQ9NTU4 200 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 NLE1Q9NVX2 485 aaPredicted RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 CRYL1Q9Y2S2 319 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 DTNAQ9Y4J8 743 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 F5H5T6 163 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 SMIM24O75264 130 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 HMBSP08397 361 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 SNRPB2P08579 225 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 ATF6P18850 670 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 CR2P20023 1033 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 SLC6A4P31645 630 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 MRPS22P82650 360 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 GNA12Q03113 381 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 GALNT3Q14435 633 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 GPNMBQ14956 572 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 MGAT5BQ3V5L5 792 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 RARS2Q5T160 578 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 REP15Q6BDI9 236 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 KLHDC10Q6PID8 442 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 UGT2A3Q6UWM9 527 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 LILRA2Q8N149 483 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 MARVELD2Q8N4S9 558 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 ICA1LQ8NDH6 482 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 CATSPER1Q8NEC5 780 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 ADCY4Q8NFM4 1077 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 OR13C4Q8NGS5 318 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 PIP4K2CQ8TBX8 421 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 BLOC1S5Q8TDH9 187 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 USP13Q92995 863 aaPredicted RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 C19orf60Q96EN9 201 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 DUS3LQ96G46 650 aaKnown RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 HHIPL1Q96JK4 782 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 KLHL32Q96NJ5 620 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 ATOH8Q96SQ7 321 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 SEPT5Q99719 369 aaPredicted RBP9.43□□□□□ -0.9
PDPN-212ENST00000621990 SLC25A23Q9BV35 468 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 YIPF3Q9GZM5 350 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 MED16Q9Y2X0 877 aa9.43□□□□□ -0.9
PDPN-212ENST00000621990 A0A0D9SEW6 157 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 SLC38A8A6NNN8 435 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 ENPP3O14638 875 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 CFLARO15519 480 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 KDELR3O43731 214 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 ARSAP15289 507 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 SLC11A1P49279 550 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 KCNQ1P51787 676 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 CDH4P55283 916 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 SH3BP2P78314 561 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 FOLH1Q04609 750 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 ELAVL2Q12926 359 aaKnown RBP9.42□□□□□ -0.9
PDPN-212ENST00000621990 TRAP1Q12931 704 aaKnown RBP9.42□□□□□ -0.9
PDPN-212ENST00000621990 TRIM25Q14258 630 aaKnown RBP9.42□□□□□ -0.9
PDPN-212ENST00000621990 OR4D1Q15615 310 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 MMEL1Q495T6 779 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 RTP2Q5QGT7 225 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 IRAK1BP1Q5VVH5 260 aa9.42□□□□□ -0.9
PDPN-212ENST00000621990 KANK2Q63ZY3 851 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms