RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TMEM135Q86UB9 458 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 KIAA2013Q8IYS2 634 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SLC7A5P1Q8MH63 180 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TMCO5AQ8N6Q1 288 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 NPWQ8N729 165 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 OR52K2Q8NGK3 314 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 HMGCLL1Q8TB92 370 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 VPS33AQ96AX1 596 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TCF12Q99081 682 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 OSBPL2Q9H1P3 480 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 HIPK3Q9H422 1215 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ASB7Q9H672 318 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PIGVQ9NUD9 493 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 UTP6Q9NYH9 597 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 USP22Q9UPT9 525 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 URB1O60287 2271 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 LRRC14BA6NHZ5 514 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ZBTB42B2RXF5 422 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 AGRPO00253 132 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PQBP1O60828 265 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 BAIAP3O94812 1187 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ESRRBO95718 433 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 AP2A1O95782 977 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 THP07101 528 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ELNP15502 786 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CDH3P22223 829 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ALDH4A1P30038 563 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CD68P34810 354 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CD97P48960 835 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TRPC1P48995 793 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 DPYSQ14117 519 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SPIDRQ14159 915 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 RABL3Q5HYI8 236 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 C6orf183Q5T699 404 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CYS1Q717R9 158 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CLEC14AQ86T13 490 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SAPCD2Q86UD0 394 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CUZD1Q86UP6 607 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 RETREG3Q86VR2 466 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 IFNL1Q8IU54 200 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CAMK1DQ8IU85 385 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 MFSD6LQ8IWD5 586 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 BLOC1S5Q8TDH9 187 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SEPT8Q92599 483 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 C3orf30Q96M34 536 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 MLPHQ9BV36 600 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ASPSCR1Q9BZE9 553 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ALG9Q9H6U8 611 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PRDM16Q9HAZ2 1276 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 FANCEQ9HB96 536 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TNFSF13BQ9Y275 285 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 BTRCQ9Y297 605 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SLC27A5Q9Y2P5 690 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CRYL1Q9Y2S2 319 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PCDHB7Q9Y5E2 793 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TIMM13Q9Y5L4 95 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TRPV2Q9Y5S1 764 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TRPC5OSA6NMA1 111 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 FKBP9O95302 570 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 SIX3O95343 332 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 MAGP20916 626 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 MATN1P21941 496 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 FASP25445 335 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 AXLP30530 894 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 ECT2LQ008S8 904 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 GHRHRQ02643 423 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 CRHR2Q13324 411 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 LRP8Q14114 963 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 DMC1Q14565 340 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 SAMD4BQ5PRF9 694 aaKnown RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 TSTD2Q5T7W7 516 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 NAPEPLDQ6IQ20 393 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 ARHGAP36Q6ZRI8 547 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 PRR23BQ6ZRT6 265 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 FKBP9P1Q75LS8 142 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 MIB1Q86YT6 1006 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 SPATA2LQ8IUW3 424 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 CMTR2Q8IYT2 770 aaKnown RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 DHRSXQ8N5I4 330 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 OR2T34Q8NGX1 318 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 OR2T3Q8NH03 318 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 HDAC10Q969S8 669 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 RNF145Q96MT1 663 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 PPP1R10Q96QC0 940 aaKnown RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 NPLQ9BXD5 320 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 PDZD7Q9H5P4 517 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 EXOSC4Q9NPD3 245 aaKnown RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 EXD2Q9NVH0 621 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 VPS51Q9UID3 782 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 ATP11BQ9Y2G3 1177 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 SLC45A1Q9Y2W3 748 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 LINC00854A0A1B0GVQ3 168 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 TTC24A2A3L6 582 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 TMEM247A6NEH6 219 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 M0R3G1 203 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 CBFA2T3O75081 653 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 BCL10O95999 233 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 IGFBP6P24592 240 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 PSMA4P25789 261 aaKnown RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms