RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PRLP01236 227 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 IL1BP01584 269 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 KRT14P02533 472 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 APOC2P02655 101 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PRKCGP05129 697 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 UGT2B4P06133 528 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 GSTA1P08263 222 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CCNB1P14635 433 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TIMP2P16035 220 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ZFXP17010 805 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 MX2P20592 715 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TGM2P21980 687 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CCNCP24863 283 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ITGB7P26010 798 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PTPN3P26045 913 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RBL1P28749 1068 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 HSD17B3P37058 310 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PTGER3P43115 390 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 MMP13P45452 471 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RXRGP48443 463 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 NR2C2P49116 596 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ARRB1P49407 418 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 SLC18A1P54219 525 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RHOAP61586 193 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PPP2CBP62714 309 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RPS21P63220 83 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PPP2CAP67775 309 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 DR1Q01658 176 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 SEMG2Q02383 582 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TRAF2Q12933 501 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ILKQ13418 452 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ITIH4Q14624 930 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PDK1Q15118 436 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 OASLQ15646 514 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF423Q2M1K9 1284 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 LRRC73Q5JTD7 316 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 SEL1L2Q5TEA6 688 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ICE2Q659A1 982 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 KIAA0895LQ68EN5 471 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ALG1LQ6GMV1 187 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 NCEH1Q6PIU2 408 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 BRAT1Q6PJG6 821 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 C6orf89Q6UWU4 347 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CCDC121Q6ZUS5 278 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 BZW1Q7L1Q6 419 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PARS2Q7L3T8 475 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TMC3Q7Z5M5 1100 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CCDC91Q7Z6B0 441 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ADAT2Q7Z6V5 191 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PRUNE1Q86TP1 453 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PRPF39Q86UA1 669 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ZC3H18Q86VM9 953 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RELL1Q8IUW5 271 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CCDC13Q8IYE1 715 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TMEFF1Q8IYR6 380 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RGL4Q8IZJ4 473 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CACTIN-AS1Q8N1I8 211 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RYBPQ8N488 228 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 MFSD2AQ8NA29 543 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 GLIS1Q8NBF1 620 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 DENND6BQ8NEG7 585 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 FUBP1Q96AE4 644 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TADA1Q96BN2 335 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RMDN1Q96DB5 314 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 FEM1CQ96JP0 617 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CABS1Q96KC9 395 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TBATAQ96M53 351 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 HSPA12BQ96MM6 686 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 GDAP1L1Q96MZ0 367 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 KLHL32Q96NJ5 620 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 SERPINB12Q96P63 405 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 LENG8Q96PV6 779 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 MAK16Q9BXY0 300 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 BRD8Q9H0E9 1235 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ZDHHC6Q9H6R6 413 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 CAAP1Q9H8G2 361 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 EBF2Q9HAK2 575 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 NT5MQ9NPB1 228 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 EVA1BQ9NVM1 165 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 RBM22Q9NW64 420 aaKnown RBP eCLIP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 WHRNQ9P202 907 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 SEPT3Q9UH03 358 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 IL36AQ9UHA7 158 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 DNPEPQ9ULA0 475 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ITM2BQ9Y287 266 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PCDHGC4Q9Y5F7 938 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ACTL7BQ9Y614 415 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 HS3ST3A1Q9Y663 406 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ANKRD36A6QL64 1941 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TNRC6BQ9UPQ9 1833 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CEP192Q8TEP8 1941 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 FAM221BA6H8Z2 402 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TMEM8BA6NDV4 472 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CFAP73A6NFT4 308 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 C16orf96A6NNT2 1141 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 H7C0C1 242 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms