RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ERAL1O75616 437 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 IFNA6P05013 189 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 SEC23AQ15436 765 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PLPPR4Q7Z2D5 763 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 RAVER1Q8IY67 606 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 CYP2W1Q8TAV3 490 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PYDC1Q8WXC3 89 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 EFHD2Q96C19 240 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 ZBTB10Q96DT7 871 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 TRNT1Q96Q11 434 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PLEKHA1Q9HB21 404 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 NINJ2Q9NZG7 142 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PARP4Q9UKK3 1724 aaKnown RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 SP100P23497 879 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 DMPKQ09013 629 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 PTPRNQ16849 979 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 TCEAL6Q6IPX3 200 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 HIPK1Q86Z02 1210 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 TLE6Q9H808 572 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
CCDC144B-208ENST00000618081 SAGP10523 405 aaPredicted RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ASMTP46597 345 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 CXCR3P49682 368 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 PKNOX1P55347 436 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 BMT2Q1RMZ1 405 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 BRMS1LQ5PSV4 323 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 CPTPQ5TA50 214 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 TMPRSS11AQ6ZMR5 421 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 IQCF2Q8IXL9 164 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 PPTC7Q8NI37 304 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SGK2Q9HBY8 427 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 CLDN4O14493 209 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 CHN2P52757 468 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ELP6Q0PNE2 266 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SUZ12Q15022 739 aaKnown RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 PLPP4Q5VZY2 271 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 CAPN13Q6MZZ7 669 aaPredicted RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 UNC5AQ6ZN44 842 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 GPR142Q7Z601 462 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 GPR180Q86V85 440 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ACO2Q99798 780 aaKnown RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 AARSD1Q9BTE6 412 aaKnown RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF208O43345 1280 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 PLOD3O60568 738 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 TLR5O60602 858 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC26A3P40879 764 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SSR2P43308 183 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 PTPN9P43378 593 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ZNF844Q08AG5 666 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 RFX4Q33E94 735 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 XKR4Q5GH76 650 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM91A1Q658Y4 838 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SNX20Q7Z614 316 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 RBM23Q86U06 439 aaKnown RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 MARK4Q96L34 752 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 NDNQ99608 321 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 TTPALQ9BTX7 342 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 PSMD11O00231 422 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 RIPK1Q13546 671 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 CCDC80Q76M96 950 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 OR2L5Q8NG80 312 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ZBTB45Q96K62 511 aaPredicted RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 CYP3A4P08684 503 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 KCNA5P22460 613 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 RPP38P78345 283 aaKnown RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 L2HGDHQ9H9P8 463 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 A0A1W2PRG6 482 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 TNFRSF21O75509 655 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 MNDAP41218 407 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ERVK-21P61565 698 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 FAM124AQ86V42 546 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 KIAA0319LQ8IZA0 1049 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 MAB21L3Q8N8X9 362 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 COPS8Q99627 209 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SEC14L3Q9UDX4 400 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 GGA2Q9UJY4 613 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SAMD4AQ9UPU9 718 aaKnown RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 AGLP35573 1532 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ARID1BQ8NFD5 2236 aaPredicted RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 MATKP42679 507 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 PARP15Q460N3 678 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 GET4Q7L5D6 327 aaPredicted RBP11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 ALLCQ8N6M5 410 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 LRRC17Q8N6Y2 441 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 FRMD6Q96NE9 622 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 MTMR9Q96QG7 549 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
CCDC144B-208ENST00000618081 A0A1W2PQ67 120 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 OR6C75A6NL08 312 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 H3BQF6 201 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 RGS20O76081 388 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 TSHRP16473 764 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 NT5DC1Q5TFE4 455 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 RIMBP3CA6NJZ7 1639 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 RIMBP3BA6NNM3 1639 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 RIMBP3Q9UFD9 1639 aa11.16□□□□□ -0.62
CCDC144B-208ENST00000618081 TMEM150BA6NC51 233 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms