RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 ODF2Q5BJF6 829 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 C19orf48Q6RUI8 117 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 HSD11B1LQ7Z5J1 315 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 CCDC13Q8IYE1 715 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 CBARPQ8N350 705 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-228ENST00000617771 WDR48Q8TAF3 677 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 MAK16Q9BXY0 300 aaKnown RBP25.22■■□□□ 1.63
VEGFA-228ENST00000617771 FGF22Q9HCT0 170 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 PHPT1Q9NRX4 125 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-228ENST00000617771 SIRPGQ9P1W8 387 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 GULP1Q9UBP9 304 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 GPR34Q9UPC5 381 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 PCDHB1Q9Y5F3 818 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 MYLKQ15746 1914 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 PDHA1P08559 390 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 MYCLP1P12525 358 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-228ENST00000617771 ETV3P41162 512 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 SLC1A1P43005 524 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 DSC2Q02487 901 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 SLC10A2Q12908 348 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-228ENST00000617771 PERM1Q5SV97 790 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 LRRC38Q5VT99 294 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 NYAP1Q6ZVC0 841 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.21■■□□□ 1.63
VEGFA-228ENST00000617771 LGR4Q9BXB1 951 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 MRPL40Q9NQ50 206 aaKnown RBP25.21■■□□□ 1.63
VEGFA-228ENST00000617771 MOSPD1Q9UJG1 213 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 DNPEPQ9ULA0 475 aa25.21■■□□□ 1.63
VEGFA-228ENST00000617771 A0A087WV48 116 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 BRINP1O60477 761 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 TCEA3O75764 348 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 HLA-DQB2P05538 268 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 TCEAL1Q15170 157 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 KCTD16Q68DU8 428 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 CRTC1Q6UUV9 634 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 TAF8Q7Z7C8 310 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 TSPAN33Q86UF1 283 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 HEATR4Q86WZ0 1026 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 PELI3Q8N2H9 469 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 KYQ8NBH2 561 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 HNRNPLLQ8WVV9 542 aaKnown RBP25.2■■□□□ 1.62
VEGFA-228ENST00000617771 GRAMD1AQ96CP6 724 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 DCBLD2Q96PD2 775 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 CCDC3Q9BQI4 270 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 TDRD1Q9BXT4 1180 aaKnown RBP25.2■■□□□ 1.62
VEGFA-228ENST00000617771 CYP4F12Q9HCS2 524 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 DDX56Q9NY93 547 aaKnown RBP25.2■■□□□ 1.62
VEGFA-228ENST00000617771 RALYQ9UKM9 306 aaKnown RBP25.2■■□□□ 1.62
VEGFA-228ENST00000617771 HEY1Q9Y5J3 304 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 LRP4O75096 1905 aa25.2■■□□□ 1.62
VEGFA-228ENST00000617771 A0A0J9YYE9 177 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 PRSS38A1L453 326 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 GOLGA6CA6NDK9 693 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 GOLGA6BA6NDN3 693 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 APOL1O14791 398 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 USP12O75317 370 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 TRBC1P01850 177 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 KRT1P04264 644 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 GOLGA6DP0CG33 693 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 ZFXP17010 805 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-228ENST00000617771 ZNF30P17039 623 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 TEAD1P28347 426 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 ACTN2P35609 894 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 PPIDQ08752 370 aaKnown RBP25.19■■□□□ 1.62
VEGFA-228ENST00000617771 SLC9A4Q6AI14 798 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 RAET1GQ6H3X3 334 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 RBM44Q6ZP01 1051 aaKnown RBP25.19■■□□□ 1.62
VEGFA-228ENST00000617771 Q6ZVL8 140 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 RHOT1Q8IXI2 618 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 PLD5Q8N7P1 536 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 OR6C4Q8NGE1 309 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 LRRN4Q8WUT4 740 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 TEX101Q9BY14 249 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 GOLGA6AQ9NYA3 693 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 CHKBQ9Y259 395 aa25.19■■□□□ 1.62
VEGFA-228ENST00000617771 C3orf70A6NLC5 250 aaPredicted RBP25.18■■□□□ 1.62
VEGFA-228ENST00000617771 JCHAINP01591 159 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 RPL26P61254 145 aaKnown RBP25.18■■□□□ 1.62
VEGFA-228ENST00000617771 DPTQ07507 201 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 PTPRRQ15256 657 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 ISXQ2M1V0 245 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 COL28A1Q2UY09 1125 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 LRRC66Q68CR7 880 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 TECPR1Q7Z6L1 1165 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 ARRDC2Q8TBH0 407 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 LGMNQ99538 433 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 TMEM168Q9H0V1 697 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 RPL26L1Q9UNX3 145 aaKnown RBP25.18■■□□□ 1.62
VEGFA-228ENST00000617771 KNTC1P50748 2209 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 LAMA5O15230 3695 aa25.18■■□□□ 1.62
VEGFA-228ENST00000617771 KCNK1O00180 336 aa25.17■■□□□ 1.62
VEGFA-228ENST00000617771 RRP8O43159 456 aaKnown RBP25.17■■□□□ 1.62
VEGFA-228ENST00000617771 TLX3O43711 291 aaPredicted RBP25.17■■□□□ 1.62
VEGFA-228ENST00000617771 SPOPO43791 374 aa25.17■■□□□ 1.62
VEGFA-228ENST00000617771 MAGEA1P43355 309 aa25.17■■□□□ 1.62
VEGFA-228ENST00000617771 IFI35P80217 286 aaPredicted RBP25.17■■□□□ 1.62
VEGFA-228ENST00000617771 CDK3Q00526 305 aa25.17■■□□□ 1.62
VEGFA-228ENST00000617771 NIPAL4Q0D2K0 466 aa25.17■■□□□ 1.62
VEGFA-228ENST00000617771 PDK1Q15118 436 aa25.17■■□□□ 1.62
VEGFA-228ENST00000617771 LRRC69Q6ZNQ3 347 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms