RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NT5DC3Q86UY8 548 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 CAPZA3Q96KX2 299 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 SLC2A13Q96QE2 648 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 NCAPGQ9BPX3 1015 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 A0A0D9SEW6 157 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 HSF2BPO75031 334 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 DAB1O75553 588 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 ALPIP09923 528 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 CTSEP14091 401 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 LIFP15018 202 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 TFE3P19532 575 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 ATP1A2P50993 1020 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 DNA2P51530 1060 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 RNASE9P60153 205 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 SLC6A3Q01959 620 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 C16orf72Q14CZ0 275 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 ALFQ53S48 1182 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 PHF19Q5T6S3 580 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 SEL1L2Q5TEA6 688 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 TMEM164Q5U3C3 297 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 PLEKHA7Q6IQ23 1121 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 XYLT1Q86Y38 959 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 ZDHHC17Q8IUH5 632 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 HID1Q8IV36 788 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 SLITRK4Q8IW52 837 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 DCAF4L2Q8NA75 395 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 C3orf20Q8ND61 904 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 OR6C4Q8NGE1 309 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 HES6Q96HZ4 224 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 HEPHQ9BQS7 1158 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 CARD9Q9H257 536 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 ALG6Q9Y672 507 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 CREBBPQ92793 2442 aa17.71■□□□□ 0.43
TRAPPC3-209ENST00000616395 ANKRD17O75179 2603 aaKnown RBP17.71■□□□□ 0.43
TRAPPC3-209ENST00000616395 GOLGA6L10A0A0M3HER8 536 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 MTSS1O43312 755 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 CCL4P13236 92 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 MAN1A1P33908 653 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 CD97P48960 835 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 CCNHP51946 323 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 HK3P52790 923 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 PIGHQ14442 188 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 C5orf22Q49AR2 442 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 EFHC1Q5JVL4 640 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 TEX35Q5T0J7 233 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 FAM102AQ5T9C2 384 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 SLC26A9Q7LBE3 791 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 ATCAYQ86WG3 371 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 MAIP1Q8WWC4 291 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 TSACCQ96A04 125 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 B3GNT4Q9C0J1 378 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 SIK2Q9H0K1 926 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 SEMA6CQ9H3T2 930 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 MBNL1Q9NR56 388 aaKnown RBP17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 APPL1Q9UKG1 709 aa17.71■□□□□ 0.42
TRAPPC3-209ENST00000616395 LRRK1Q38SD2 2015 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 PGRMC1O00264 195 aaKnown RBP17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 FANCGO15287 622 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 CEP104O60308 925 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 PAGE1O75459 146 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 BLKP51451 505 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 ARSDP51689 593 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 GSCP56915 257 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 NME3Q13232 169 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 ALG11Q2TAA5 492 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 CARD16Q5EG05 197 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 TRNP1Q6NT89 227 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 SPRED1Q7Z699 444 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 GKN2Q86XP6 184 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 DNAAF5Q86Y56 855 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 IL22RA1Q8N6P7 574 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 RAB7BQ96AH8 199 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 CATSPER2Q96P56 530 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 ZDHHC6Q9H6R6 413 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 TMPRSS4Q9NRS4 437 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 ASNSD1Q9NWL6 643 aa17.7■□□□□ 0.42
TRAPPC3-209ENST00000616395 C16orf96A6NNT2 1141 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 ATMINO43313 823 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 PROSCO94903 275 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 GLI1P08151 1106 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 KRT3P12035 628 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 CTNNA2P26232 953 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 GKP32189 559 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 FLT3P36888 993 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 GABRB2P47870 512 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 SERPINH1P50454 418 aaKnown RBP17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 RWDD2BP57060 319 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 MAMLD1Q13495 774 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 RD3Q7Z3Z2 195 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 PCDH20Q8N6Y1 951 aaKnown RBP17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 GPR156Q8NFN8 814 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 OR7D4Q8NG98 312 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 ACTRT1Q8TDG2 376 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 PMEPA1Q969W9 287 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 ABHD17AQ96GS6 310 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 EPAS1Q99814 870 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 CEP44Q9C0F1 390 aa17.69■□□□□ 0.42
TRAPPC3-209ENST00000616395 ICE1Q9Y2F5 2266 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 CCDC188H7C350 402 aa17.68■□□□□ 0.42
TRAPPC3-209ENST00000616395 SRGAP2O75044 1071 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms