RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ADGRG6Q86SQ4 1221 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM47BQ8NA70 645 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 HGH1Q9BTY7 390 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 C1orf50Q9BV19 199 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 CATSPERZQ9NTU4 200 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 BLOC1S6Q9UL45 172 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC8A2Q9UPR5 921 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 Q9Y3F1 56 aa5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 COPG1Q9Y678 874 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 SPTBN1Q01082 2364 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 GOLGB1Q14789 3259 aaKnown RBP5.65□□□□□ -1.51
SYNCRIP-204ENST00000616122 PLCH1Q4KWH8 1693 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 AHCYL1O43865 530 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 KATNA1O75449 491 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 EPOP01588 193 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 NR1H2P55055 460 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 FOXD4Q12950 439 aaPredicted RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADRM1Q16186 407 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PPM1LQ5SGD2 360 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 CYP4V2Q6ZWL3 525 aaPredicted RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 C14orf80Q86SX3 495 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADAMTSL2Q86TH1 951 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPSM1Q86YR5 675 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 MYO1HQ8N1T3 1032 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 LRRC43Q8N309 656 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PTCD3Q96EY7 689 aaKnown RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 SUSD3Q96L08 255 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PANX3Q96QZ0 392 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPR21Q99679 349 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TTPALQ9BTX7 342 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ASB8Q9H765 288 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRMT13Q9NUP7 481 aaKnown RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 NHSL1Q5SYE7 1610 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 C4AP0C0L4 1744 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF839A8K0R7 811 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 J3KR12 359 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 KCNQ1P51787 676 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 SP3Q02447 781 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 CTC1Q2NKJ3 1217 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM45BPQ6NSW5 357 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PAQR3Q6TCH7 311 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 DEFB128Q7Z7B8 93 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 MFN1Q8IWA4 741 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR13C4Q8NGS5 318 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM45AQ8TCE6 357 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 BRSK1Q8TDC3 778 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 NT5C3BQ969T7 300 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 DCUN1D1Q96GG9 259 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 MS4A4AQ96JQ5 239 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PTPN18Q99952 460 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ASPSCR1Q9BZE9 553 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 SMOC2Q9H3U7 446 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNHIT2Q9UHR6 403 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 A0A087X1B8 175 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 DHRS12A0PJE2 317 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCDC162PA2VCL2 907 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM149AA5PLN7 773 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 E7ENX8 843 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PQBP1O60828 265 aaKnown RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 FKBP9O95302 570 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 GUCA1CO95843 209 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 C1RP00736 705 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TTPAP49638 278 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 CHN2P52757 468 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 HK2P52789 917 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 RAD23AP54725 363 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 FOLH1Q04609 750 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 CPSF6Q16630 551 aaKnown RBP eCLIP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 VPS26BQ4G0F5 336 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ARMC12Q5T9G4 340 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 FKBP9P1Q75LS8 142 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ACVR1CQ8NER5 493 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 DGCR14Q96DF8 476 aaKnown RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 OXCT2Q9BYC2 517 aaPredicted RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 MRPL9Q9BYD2 267 aaKnown RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 EBF3Q9H4W6 596 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 HMX1Q9NP08 348 aaPredicted RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 GKN1Q9NS71 199 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 HS3ST4Q9Y661 456 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 H7C4K7 107 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 UBXN8O00124 270 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 URODP06132 367 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 RPL17P18621 184 aaKnown RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ITGAXP20702 1163 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TACR2P21452 398 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ACLYP53396 1101 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 AQP4P55087 323 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 GALNT3Q14435 633 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PITRM1Q5JRX3 1037 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PM20D1Q6GTS8 502 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TTC23LQ6PF05 361 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ANKS3Q6ZW76 656 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF280BQ86YH2 543 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TXNDC5Q8NBS9 432 aaKnown RBP5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 VPS37AQ8NEZ2 397 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 PPM1MQ96MI6 270 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 UROC1Q96N76 676 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRAPPC9Q96Q05 1148 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 TUBGCP5Q96RT8 1024 aa5.64□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC39A3Q9BRY0 314 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms