RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 UBLCP1Q8WVY7 318 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SPOCK2Q92563 424 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 EID2BQ96D98 161 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 STAMBPL1Q96FJ0 436 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF641Q96N77 438 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 RANBP9Q96S59 729 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 KIFC1Q9BW19 673 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 TPSD1Q9BZJ3 242 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 IL22Q9GZX6 179 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 MKRN2Q9H000 416 aaKnown RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 RSPH9Q9H1X1 276 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ARRDC1-AS1Q9H2J1 176 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
PCDH9-205ENST00000614931 CD93Q9NPY3 652 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 CHRAC1Q9NRG0 131 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SMYD2Q9NRG4 433 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 IL1RAPL1Q9NZN1 696 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 BFARQ9NZS9 450 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 SERGEFQ9UGK8 458 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 GGT7Q9UJ14 662 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 PHTF1Q9UMS5 762 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ITM2BQ9Y287 266 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 PPIL1Q9Y3C6 166 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF711Q9Y462 761 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 PCDHGA5Q9Y5G8 931 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 ARL5AQ9Y689 179 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 MAD1L1Q9Y6D9 718 aa8.06□□□□□ -1.12
PCDH9-205ENST00000614931 RALGAPA1Q6GYQ0 2036 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ZCWPW2A0A1B0GU75 182 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 MROH6A6NGR9 719 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 CAPN8A6NHC0 703 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 SDR42E2A6NKP2 422 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 C16orf96A6NNT2 1141 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 UPK3BL1B0FP48 263 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 UPK3BL2E5RIL1 263 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 NPC1O15118 1278 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 MID1O15344 667 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 PIAS1O75925 651 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 SASH3O75995 380 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ALDH1A2O94788 518 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 RHOBTB1O94844 696 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 TTC4O95801 387 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 IL1BP01584 269 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 SLC4A1P02730 911 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 PRNPP04156 253 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 SHBGP04278 402 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 F7P08709 466 aaPredicted RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 C1SP09871 688 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 GM2AP17900 193 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 PGAM1P18669 254 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 CA4P22748 312 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 LHCGRP22888 699 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ADRA1DP25100 572 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ITGB7P26010 798 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ARNTP27540 789 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 DRD3P35462 400 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 HNF1BP35680 557 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 P2RY2P41231 377 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 GRIA4P48058 902 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ARSDP51689 593 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF140P52738 457 aaPredicted RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 RPL26P61254 145 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 RALGDSQ12967 914 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ELAVL3Q14576 367 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 GRM3Q14832 879 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 CRYMQ14894 314 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ANKRD20A4Q4UJ75 823 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF805Q5CZA5 627 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 PCID2Q5JVF3 399 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 TSTD2Q5T7W7 516 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ESRP1Q6NXG1 681 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 CASC4Q6P4E1 433 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 RFLNAQ6ZTI6 216 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 TRMT10CQ7L0Y3 403 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 LYSMD3Q7Z3D4 306 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 C11orf74Q86VG3 221 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 AADATQ8N5Z0 425 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 OR13C4Q8NGS5 318 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 OR13J1Q8NGT2 312 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 OR2T3Q8NH03 318 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 OR2W6PQ8NHA6 318 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 NETO1Q8TDF5 533 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 PYROXD1Q8WU10 500 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF669Q96BR6 464 aaPredicted RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 LRRC39Q96DD0 335 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 MFSD3Q96ES6 412 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 DNAJC1Q96KC8 554 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 MCCC1Q96RQ3 725 aaPredicted RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 RTKNQ9BST9 563 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 OSBPL1AQ9BXW6 950 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 FUT8Q9BYC5 575 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 MRM3Q9HC36 420 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ARFGAP3Q9NP61 516 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 PCDH12Q9NPG4 1184 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 TREX1Q9NSU2 369 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 SLC17A6Q9P2U8 582 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 DKK3Q9UBP4 350 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 B4GALT6Q9UBX8 382 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 ZC3H7BQ9UGR2 993 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 CDV3Q9UKY7 258 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms