RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 MLPHQ9BV36 600 aaPredicted RBP5.71□□□□□ -1.5
CPNE3-208ENST00000614678 LRRC61Q9BV99 259 aa5.71□□□□□ -1.5
CPNE3-208ENST00000614678 MAK16Q9BXY0 300 aaKnown RBP5.71□□□□□ -1.5
CPNE3-208ENST00000614678 OSBPL8Q9BZF1 889 aa5.71□□□□□ -1.5
CPNE3-208ENST00000614678 MOSPD1Q9UJG1 213 aa5.71□□□□□ -1.5
CPNE3-208ENST00000614678 TMPRSS11EQ9UL52 423 aa5.71□□□□□ -1.5
CPNE3-208ENST00000614678 DNPEPQ9ULA0 475 aa5.71□□□□□ -1.5
CPNE3-208ENST00000614678 TSPAN11A1L157 253 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SLC7A4O43246 635 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 METTL18O95568 372 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SYPP08247 313 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TSHRP16473 764 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 XPAP23025 273 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 NSUN2Q08J23 767 aaKnown RBP eCLIP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 ZNF423Q2M1K9 1284 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 CFAP58Q5T655 872 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 ACBD5Q5T8D3 534 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 C11orf63Q6NUN7 778 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 HID1Q8IV36 788 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 LZTR1Q8N653 840 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TRIM56Q9BRZ2 755 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 GDF3Q9NR23 364 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 GPR27Q9NS67 375 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 IGSF10Q6WRI0 2623 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 A0A1W2PNU3 283 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 ZNF185O15231 689 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 PIAS2O75928 621 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 CPP00450 1065 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TPH1P17752 444 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SERPINB6P35237 376 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 KCNJ1P48048 391 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SFSWAPQ12872 951 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 LRRC14Q15048 493 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 PEX26Q7Z412 305 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 MAP7D3Q8IWC1 876 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 CBARPQ8N350 705 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 GPR26Q8NDV2 337 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 MDM1Q8TC05 714 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 LMX1AQ8TE12 382 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 COQ10AQ96MF6 247 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TSGA13Q96PP4 275 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 POLR1EQ9GZS1 481 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 USP29Q9HBJ7 922 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 RCOR3Q9P2K3 495 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 DKK3Q9UBP4 350 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SUSD2Q9UGT4 822 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 ZFC3H1O60293 1989 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SCN8AQ9UQD0 1980 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 A0A0A6YYK5 440 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 A0A0J9YYE9 177 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 PSTPIP1O43586 416 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TSPAN6O43657 245 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 AP1G1O43747 822 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 HEXIM1O94992 359 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TRBC1P01850 177 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 ITGAVP06756 1048 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 JUNDP17535 347 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 PSMB4P28070 264 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 HOXD12P35452 270 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SLC1A1P43005 524 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 GEMIN4P57678 1058 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 MRPS25P82663 173 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 KLF1Q13351 362 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TMEM52BQ4KMG9 183 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TEX44Q53QW1 395 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 PERM1Q5SV97 790 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 LRRC38Q5VT99 294 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 GUSBP11Q6P575 273 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 PID1Q7Z2X4 250 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 TMPRSS9Q7Z410 1059 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 HEATR4Q86WZ0 1026 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 GPR161Q8N6U8 529 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 FAM71DQ8N9W8 422 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 ZNF548Q8NEK5 533 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 IPMKQ8NFU5 416 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 P3H4Q92791 437 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 SCRN2Q96FV2 425 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 CRELD1Q96HD1 420 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 HES6Q96HZ4 224 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 MRGPRX2Q96LB1 330 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 ZNF641Q96N77 438 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 RIOK2Q9BVS4 552 aaKnown RBP5.7□□□□□ -1.5
CPNE3-208ENST00000614678 OSBPL1AQ9BXW6 950 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 PCDH9Q9HC56 1237 aa5.7□□□□□ -1.5
CPNE3-208ENST00000614678 C1orf232A0A0U1RR37 186 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 H7C0C1 242 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 YY2O15391 372 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 AKT2P31751 481 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 HTR7P34969 479 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 ATP5OP48047 213 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 CDKN1CP49918 316 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-208ENST00000614678 RENBPP51606 427 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 KIF5AQ12840 1032 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 DPPA4Q7L190 304 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 COL27A1Q8IZC6 1860 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-208ENST00000614678 IMP4Q96G21 291 aaKnown RBP5.69□□□□□ -1.5
CPNE3-208ENST00000614678 APOOQ9BUR5 198 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 TMEM121BQ9BXQ6 578 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-208ENST00000614678 TLR10Q9BXR5 811 aa5.69□□□□□ -1.5
CPNE3-208ENST00000614678 CYP4F12Q9HCS2 524 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms