RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 WDR59Q6PJI9 974 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SLC22A16Q86VW1 577 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CLYBLQ8N0X4 340 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SETD6Q8TBK2 473 aa8.78□□□□□ -1
TTC28-208ENST00000612946 PABPC5Q96DU9 382 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 PANX3Q96QZ0 392 aa8.78□□□□□ -1
TTC28-208ENST00000612946 GFOD1Q9NXC2 390 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SAE1Q9UBE0 346 aaPredicted RBP8.78□□□□□ -1
TTC28-208ENST00000612946 TRPS1Q9UHF7 1281 aa8.78□□□□□ -1
TTC28-208ENST00000612946 PRR5-ARHGAP8B1AHC4 643 aa8.78□□□□□ -1
TTC28-208ENST00000612946 TDP2O95551 362 aa8.78□□□□□ -1
TTC28-208ENST00000612946 MATKP42679 507 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CTSKP43235 329 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ARHGAP8P85298 464 aa8.78□□□□□ -1
TTC28-208ENST00000612946 GNA12Q03113 381 aa8.78□□□□□ -1
TTC28-208ENST00000612946 LINC00471Q8N535 108 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SEPT5Q99719 369 aaPredicted RBP8.78□□□□□ -1
TTC28-208ENST00000612946 TBL1YQ9BQ87 522 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ZCCHC2Q9C0B9 1178 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 USP29Q9HBJ7 922 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ASB14A6NK59 587 aa8.78□□□□□ -1
TTC28-208ENST00000612946 C1orf196B1AJZ1 125 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ABCB7O75027 752 aa8.78□□□□□ -1
TTC28-208ENST00000612946 DCKP27707 260 aa8.78□□□□□ -1
TTC28-208ENST00000612946 HOXA13P31271 388 aaPredicted RBP8.78□□□□□ -1
TTC28-208ENST00000612946 LSM3P62310 102 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 TKFCQ3LXA3 575 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ZNF470Q6ECI4 717 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CPSF7Q8N684 471 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 NKX2-3Q8TAU0 364 aa8.78□□□□□ -1
TTC28-208ENST00000612946 KLHL5Q96PQ7 755 aa8.78□□□□□ -1
TTC28-208ENST00000612946 RPL36Q9Y3U8 105 aaKnown RBP8.78□□□□□ -1
TTC28-208ENST00000612946 FGF10O15520 208 aaPredicted RBP8.78□□□□□ -1
TTC28-208ENST00000612946 PROZP22891 400 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ASMTP46597 345 aa8.78□□□□□ -1
TTC28-208ENST00000612946 TEAD4Q15561 434 aa8.78□□□□□ -1
TTC28-208ENST00000612946 ADAMTSL2Q86TH1 951 aa8.78□□□□□ -1
TTC28-208ENST00000612946 HSPBAP1Q96EW2 488 aa8.78□□□□□ -1
TTC28-208ENST00000612946 SH2D3AQ9BRG2 576 aa8.78□□□□□ -1
TTC28-208ENST00000612946 CLCA2Q9UQC9 943 aa8.78□□□□□ -1
TTC28-208ENST00000612946 LOC102724428A0A0B4J2F2 783 aa8.77□□□□□ -1
TTC28-208ENST00000612946 OTCP00480 354 aa8.77□□□□□ -1
TTC28-208ENST00000612946 HPRP00739 348 aa8.77□□□□□ -1
TTC28-208ENST00000612946 CYP2F1P24903 491 aa8.77□□□□□ -1
TTC28-208ENST00000612946 SIK1P57059 783 aa8.77□□□□□ -1
TTC28-208ENST00000612946 BIKQ13323 160 aa8.77□□□□□ -1
TTC28-208ENST00000612946 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1
TTC28-208ENST00000612946 CHST15Q7LFX5 561 aaPredicted RBP8.77□□□□□ -1
TTC28-208ENST00000612946 TSPAN33Q86UF1 283 aa8.77□□□□□ -1
TTC28-208ENST00000612946 TMEM192Q8IY95 271 aa8.77□□□□□ -1
TTC28-208ENST00000612946 DNAJB3Q8WWF6 145 aa8.77□□□□□ -1
TTC28-208ENST00000612946 EXOC2Q96KP1 924 aa8.77□□□□□ -1
TTC28-208ENST00000612946 SNX27Q96L92 541 aa8.77□□□□□ -1
TTC28-208ENST00000612946 POMPQ9Y244 141 aa8.77□□□□□ -1
TTC28-208ENST00000612946 TTC34A8MYJ7 566 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 M0R036 132 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 OGTO15294 1046 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 AVPR1AP37288 418 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 MAPK10P53779 464 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 RAB10P61026 200 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 OVOS1Q6IE37 1185 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 PAOXQ6QHF9 649 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ALYREFQ86V81 257 aaKnown RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 IFNL1Q8IU54 200 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ATAD1Q8NBU5 361 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 OR7G1Q8NGA0 311 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 SLCO2A1Q92959 643 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 GULP1Q9UBP9 304 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 STUB1Q9UNE7 303 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 LMO7Q8WWI1 1683 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ADGRB3O60242 1522 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ACOX3O15254 700 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 USP17L8P0C7I0 530 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 MYBP10242 640 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 PRMT2P55345 433 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 GOLGA7BQ2TAP0 167 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 LSM12Q3MHD2 195 aaKnown RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 VMP1Q96GC9 406 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 OR6C70A6NIJ9 312 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 PLIN3O60664 434 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 CAPN15O75808 1086 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 RRM1P23921 792 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 VEPH1Q14D04 833 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ANKDD1AQ495B1 522 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 SLC25A25Q6KCM7 469 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 GPSM1Q86YR5 675 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 EBNA1BP2Q99848 306 aaKnown RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 SEMA6BQ9H3T3 888 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ALG2Q9H553 416 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 OSGEPQ9NPF4 335 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ITM2AO43736 263 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 AOC1P19801 751 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 CD6P30203 668 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ARPP19P56211 112 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ZIK1Q3SY52 487 aaPredicted RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 MFSD7Q6UXD7 560 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 GPRIN3Q6ZVF9 776 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ATP6AP2A0A1C7CYW4 349 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 SLC28A2O43868 658 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms