RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 MANEALQ5VSG8 457 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 ACAD10Q6JQN1 1059 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 ZNF438Q7Z4V0 828 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 IRF2BP2Q7Z5L9 587 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 SLFN11Q7Z7L1 901 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 UNC5BQ8IZJ1 945 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 AOPEPQ8N6M6 819 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 JOSD2Q8TAC2 188 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 SLC45A3Q96JT2 553 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 GDAP1L1Q96MZ0 367 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 CNPY3Q9BT09 278 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 DDA1Q9BW61 102 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 RAB6CQ9H0N0 254 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 SEPT11Q9NVA2 429 aaKnown RBP13.8□□□□□ -0.2
LINC00116-203ENST00000611969 TMEM248Q9NWD8 314 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 TMEM9Q9P0T7 183 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 TMEM63CQ9P1W3 806 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 NEU3Q9UQ49 428 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 ABCA12Q86UK0 2595 aa13.8□□□□□ -0.2
LINC00116-203ENST00000611969 SHANK1Q9Y566 2161 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 ZSCAN5CA6NGD5 496 aaPredicted RBP13.79□□□□□ -0.2
LINC00116-203ENST00000611969 PRKCGP05129 697 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 KIAA1024LP59773 190 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 KLRB1Q12918 225 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 MTM1Q13496 603 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 NR1D2Q14995 579 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 DEFB109BQ30KR1 87 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 NKAIN2Q5VXU1 208 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 ANKS6Q68DC2 871 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 RWDD4Q6NW29 188 aaKnown RBP13.79□□□□□ -0.2
LINC00116-203ENST00000611969 DCUN1D2Q6PH85 259 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 PHLDB2Q86SQ0 1253 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 NLRP14Q86W24 1093 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 ATL2Q8NHH9 583 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 FAM172AQ8WUF8 416 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 TBC1D31Q96DN5 1066 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 EXOC2Q96KP1 924 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 GPN2Q9H9Y4 310 aaPredicted RBP13.79□□□□□ -0.2
LINC00116-203ENST00000611969 PCDH12Q9NPG4 1184 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 SPATS2LQ9NUQ6 558 aaKnown RBP13.79□□□□□ -0.2
LINC00116-203ENST00000611969 OCIAD1Q9NX40 245 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 DKK3Q9UBP4 350 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
LINC00116-203ENST00000611969 LOC101059948A0A1B0GTJ6 334 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 A1L4Q6 167 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 LRIG2O94898 1065 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 THRAP10827 490 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 ATP1A3P13637 1013 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 GNLYP22749 145 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 CD1CP29017 333 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 HTR7P34969 479 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 MMP12P39900 470 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 ZNF165P49910 485 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 LIG3P49916 1009 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 HDAC4P56524 1084 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 YBEYP58557 167 aaPredicted RBP13.78□□□□□ -0.2
LINC00116-203ENST00000611969 DNAJC24Q6P3W2 148 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 MON1BQ7L1V2 547 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 C17orf82Q86X59 251 aaPredicted RBP13.78□□□□□ -0.2
LINC00116-203ENST00000611969 ZSWIM9Q86XI8 627 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 APOBEC4Q8WW27 367 aaKnown RBP13.78□□□□□ -0.2
LINC00116-203ENST00000611969 PATE1Q8WXA2 126 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 CASKIN2Q8WXE0 1202 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 HMCESQ96FZ2 354 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 TTYH3Q9C0H2 523 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 KLC2Q9H0B6 622 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 SUDS3Q9H7L9 328 aaPredicted RBP13.78□□□□□ -0.2
LINC00116-203ENST00000611969 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 AIPL1Q9NZN9 384 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 PILRAQ9UKJ1 303 aa13.78□□□□□ -0.2
LINC00116-203ENST00000611969 RHPN2P1A8MT19 583 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 EIF3CLB5ME19 914 aaKnown RBP13.77□□□□□ -0.21
LINC00116-203ENST00000611969 FAM72CH0Y354 149 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 TEX33O43247 280 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 RAMP2O60895 175 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 IGSF6O95976 241 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 GZMAP12544 262 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 XPAP23025 273 aaPredicted RBP13.77□□□□□ -0.21
LINC00116-203ENST00000611969 LIMK2P53671 638 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 TPM4P67936 248 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 ELP6Q0PNE2 266 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 AGERQ15109 404 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 FAM72AQ5TYM5 149 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 ZNF787Q6DD87 383 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 CAPRIN2Q6IMN6 1127 aaKnown RBP13.77□□□□□ -0.21
LINC00116-203ENST00000611969 FAM72DQ6L9T8 149 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 SCYL2Q6P3W7 929 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 TIPARPQ7Z3E1 657 aaKnown RBP13.77□□□□□ -0.21
LINC00116-203ENST00000611969 FAM72BQ86X60 149 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 FAM129CQ86XR2 697 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 NRROSQ86YC3 692 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 PELI3Q8N2H9 469 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 BMPERQ8N8U9 685 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 AGBL5Q8NDL9 886 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 STARD8Q92502 1023 aa13.77□□□□□ -0.21
LINC00116-203ENST00000611969 EIF3CQ99613 913 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms