RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 ACTL7BQ9Y614 415 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 IL1BP01584 269 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.09□□□□□ -0.318e-6■■■■■ 27.9
USP6NL-205ENST00000609104 ERICH5Q6P6B1 374 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF554Q86TJ5 538 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 TBC1D24Q9ULP9 559 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 DDX3YO15523 660 aaKnown RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 CNTN2Q02246 1040 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 SPPL2CQ8IUH8 684 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 EQTNQ9NQ60 294 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF214Q9UL59 606 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 URADA6NGE7 173 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 PRR5-ARHGAP8B1AHC4 643 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 AP2A2O94973 939 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 AMHP03971 560 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ARHGAP8P85298 464 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 FAM151BQ6UXP7 276 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 GK5Q6ZS86 529 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 AKAP7Q9P0M2 348 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ST3GAL5Q9UNP4 418 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 TRPV2Q9Y5S1 764 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 GSAPA4D1B5 854 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 XYLBO75191 536 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 DHFRP00374 187 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 AQP1P29972 269 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 GABRB2P47870 512 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 LSM12Q3MHD2 195 aaKnown RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 NR2F6P10588 404 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 HKDC1Q2TB90 917 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 CLHC1Q8NHS4 586 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 GPER1Q99527 375 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ACVR2BQ13705 512 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF730Q6ZMV8 503 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 RASAL3Q86YV0 1011 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 OR4L1Q8NH43 312 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 TRNAU1APQ9NX07 287 aaKnown RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ISM1B1AKI9 464 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 PRKG2Q13237 762 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 CARTPTQ16568 116 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 GALNT18Q6P9A2 607 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF563Q8TA94 476 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 FAM129BQ96TA1 746 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 SWI5Q1ZZU3 235 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 EBNA1BP2Q99848 306 aaKnown RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 PRDM16Q9HAZ2 1276 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 INTS7Q9NVH2 962 aaKnown RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 OAS3Q9Y6K5 1087 aaKnown RBP13.09□□□□□ -0.31
USP6NL-205ENST00000609104 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 BICRALQ6AI39 1079 aa13.09□□□□□ -0.31
USP6NL-205ENST00000609104 AZIN1O14977 448 aa13.08□□□□□ -0.31
USP6NL-205ENST00000609104 UGT2B17O75795 530 aa13.08□□□□□ -0.31
USP6NL-205ENST00000609104 CCNKO75909 580 aa13.08□□□□□ -0.31
USP6NL-205ENST00000609104 ABHD2P08910 425 aa13.08□□□□□ -0.31
USP6NL-205ENST00000609104 ITPKBP27987 946 aa13.08□□□□□ -0.31
USP6NL-205ENST00000609104 RALGPS2Q86X27 583 aaPredicted RBP13.08□□□□□ -0.31
USP6NL-205ENST00000609104 C2orf73Q8N5S3 287 aaPredicted RBP13.08□□□□□ -0.31
USP6NL-205ENST00000609104 CORO1CQ9ULV4 474 aaPredicted RBP13.08□□□□□ -0.31
USP6NL-205ENST00000609104 CTSKP43235 329 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 MYBPC3Q14896 1274 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 ANXA8L1Q5VT79 327 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 OR10G6Q8NH81 332 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 NKIRAS2Q9NYR9 191 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 TRAF6Q9Y4K3 522 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 ADCYAP1R1P41586 468 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 ESRP1Q6NXG1 681 aaKnown RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 AARSD1Q9BTE6 412 aaKnown RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 PORCNQ9H237 461 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 ZNF490Q9ULM2 529 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 NPEPPSL1A6NEC2 478 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 MNDAP41218 407 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 KCNK18Q7Z418 384 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 LMAN2LQ9H0V9 348 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 LRRC19Q9H756 370 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 IFNA6P05013 189 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 ARF4P18085 180 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 GALK1P51570 392 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 SUZ12Q15022 739 aaKnown RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 MAP4K3Q8IVH8 894 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 ACSS2Q9NR19 701 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 XPR1Q9UBH6 696 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 OLR1P78380 273 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 PABPC1LQ4VXU2 614 aaKnown RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 NIPA1Q7RTP0 329 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 RDH11Q8TC12 318 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 C11orf24Q96F05 449 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-205ENST00000609104 PRDM12Q9H4Q4 367 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 USP31Q70CQ4 1352 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 SCN2BO60939 215 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 MC4RP32245 332 aa13.08□□□□□ -0.32
USP6NL-205ENST00000609104 DPYSQ14117 519 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms