RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TKTL2Q9H0I9 626 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 NXF3Q9H4D5 531 aaKnown RBP22.4■■□□□ 1.18
SHANK2-220ENST00000608988 AKTIPQ9H8T0 292 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 MAGEE1Q9HCI5 957 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 SLC2A6Q9UGQ3 507 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 OAZ3Q9UMX2 235 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 CLEC11AQ9Y240 323 aa22.4■■□□□ 1.18
SHANK2-220ENST00000608988 COL4A4P53420 1690 aaPredicted RBP22.4■■□□□ 1.18
SHANK2-220ENST00000608988 RRN3P2A6NIE6 340 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 H3BRB1 525 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 FZD9O00144 591 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 FXYD1O00168 92 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 UBFD1O14562 309 aaKnown RBP22.39■■□□□ 1.18
SHANK2-220ENST00000608988 GABRDO14764 452 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 RPS9P46781 194 aaKnown RBP22.39■■□□□ 1.18
SHANK2-220ENST00000608988 LILRA4P59901 499 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 HERVK_113P63132 956 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 DALRD3Q5D0E6 543 aaKnown RBP22.39■■□□□ 1.18
SHANK2-220ENST00000608988 RBM20Q5T481 1227 aaKnown RBP22.39■■□□□ 1.18
SHANK2-220ENST00000608988 ANKRD26P1Q6NSI1 321 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 NIPAL1Q6NVV3 410 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 ZNF773Q6PK81 442 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 RANBP10Q6VN20 620 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 OR13F1Q8NGS4 319 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 ERVK-6Q9BXR3 956 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 TUT1Q9H6E5 874 aaKnown RBP22.39■■□□□ 1.18
SHANK2-220ENST00000608988 ARNT2Q9HBZ2 717 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 CMTM6Q9NX76 183 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 PCDHA9Q9Y5H5 950 aa22.39■■□□□ 1.18
SHANK2-220ENST00000608988 FGF10O15520 208 aaPredicted RBP22.39■■□□□ 1.17
SHANK2-220ENST00000608988 SUPT3HO75486 399 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 UGT1A6P19224 532 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 UGT1A1P22309 533 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 UGT1A4P22310 534 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 SLC6A2P23975 617 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 UGT1A3P35503 534 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 UGT1A5P35504 534 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 ADARB1P78563 741 aaKnown RBP22.39■■□□□ 1.17
SHANK2-220ENST00000608988 TGFBIQ15582 683 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 UNC50Q53HI1 259 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 CYBRD1Q53TN4 286 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 HECTD2Q5U5R9 776 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 LRRC49Q8IUZ0 686 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 DDIASQ8IXT1 998 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 DQX1Q8TE96 717 aaKnown RBP22.39■■□□□ 1.17
SHANK2-220ENST00000608988 USP33Q8TEY7 942 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 LRRC58Q96CX6 371 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 NRBF2Q96F24 287 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 SLC39A3Q9BRY0 314 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 TRIM62Q9BVG3 475 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 FSD1LQ9BXM9 530 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 UNKQ9C0B0 810 aaKnown RBP22.39■■□□□ 1.17
SHANK2-220ENST00000608988 SDR39U1Q9NRG7 319 aaPredicted RBP22.39■■□□□ 1.17
SHANK2-220ENST00000608988 GMIPQ9P107 970 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 CSADQ9Y600 493 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 PTCH2Q9Y6C5 1203 aa22.39■■□□□ 1.17
SHANK2-220ENST00000608988 PAPPA2Q9BXP8 1791 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 SHROOM3Q8TF72 1996 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 A0A1W2PPW3 197 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 FUOMA2VDF0 154 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 NFKBIEO00221 500 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 ZBTB11O95625 1053 aaPredicted RBP22.38■■□□□ 1.17
SHANK2-220ENST00000608988 ZNF286BP0CG31 522 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 CCNA2P20248 432 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 TNK2Q07912 1038 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 GRAMD4Q6IC98 578 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 TAPT1Q6NXT6 567 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 C16orf87Q6PH81 154 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 TMEM26Q6ZUK4 368 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 RAB44Q7Z6P3 723 aaPredicted RBP22.38■■□□□ 1.17
SHANK2-220ENST00000608988 CELF6Q96J87 481 aaKnown RBP22.38■■□□□ 1.17
SHANK2-220ENST00000608988 MAGED4Q96JG8 741 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 R3HDMLQ9H3Y0 253 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 TMEM45AQ9NWC5 275 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 ANAPC2Q9UJX6 822 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 VWA7Q9Y334 891 aa22.38■■□□□ 1.17
SHANK2-220ENST00000608988 TCRBV5S2A0A599 114 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 SUPT7LO94864 414 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 MT-CYBP00156 380 aaPredicted RBP22.37■■□□□ 1.17
SHANK2-220ENST00000608988 LDLRP01130 860 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 HOXC13P31276 330 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 BCAP31P51572 246 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 PSMD7P51665 324 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 EEFSECP57772 596 aaKnown RBP22.37■■□□□ 1.17
SHANK2-220ENST00000608988 NFATC3Q12968 1075 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 PITRM1Q5JRX3 1037 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 RNF135Q8IUD6 432 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 ARHGAP12Q8IWW6 846 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 PHF21BQ96EK2 531 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 MUC3BQ9H195 1237 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 RBPJLQ9UBG7 517 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 LTBP3Q9NS15 1303 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 MCM3APO60318 1980 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 BOLA2-SMG1P6H3BVE0 249 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 DFFAO00273 331 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 EI24O14681 340 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 GPR32O75388 356 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 SERPINB7O75635 380 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 ARSAP15289 507 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 LBPP18428 481 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms