RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PDE2AO00408 941 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PPM1DO15297 605 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BUB1BO60566 1050 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 ELFN1P0C7U0 828 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MYCLP1P12525 358 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BMP6P22004 513 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 COL8A1P27658 744 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MAN1A1P33908 653 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TRIM23P36406 574 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 STAT5AP42229 794 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GNPDA1P46926 289 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 GABRB2P47870 512 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RALGDSQ12967 914 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 SNAP47Q5SQN1 464 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TMEM71Q6P5X7 295 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 DNAAF5Q86Y56 855 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CAMK1DQ8IU85 385 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 EMC1Q8N766 993 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CPT1CQ8TCG5 803 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 PTCD2Q8WV60 388 aaKnown RBP11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 DPYSL5Q9BPU6 564 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 MAGEB5Q9BZ81 275 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 RETREG1Q9H6L5 497 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 NOL6Q9H6R4 1146 aaKnown RBP11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 AJAP1Q9UKB5 411 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1P1-201ENST00000604187 CRYBG3Q68DQ2 2970 aa11.77□□□□□ -0.52
PDLIM1P1-201ENST00000604187 BICDL2A1A5D9 508 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CFAP69A5D8W1 941 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 RFPL1O75677 317 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PDGFAP04085 211 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PLEKP08567 350 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 GM2AP17900 193 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CLCN1P35523 988 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 DCTP40126 519 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PPP1R2P41236 205 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 NOP2P46087 812 aaKnown RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 STX17P56962 302 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CTBSQ01459 385 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 MC2RQ01718 297 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 SQSTM1Q13501 440 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 RAPGEF1Q13905 1077 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CYTH1Q15438 398 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CDO1Q16878 200 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CRTC2Q53ET0 693 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PNCKQ6P2M8 343 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CEACAM20Q6UY09 585 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PHLDB2Q86SQ0 1253 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 ZNF761Q86XN6 746 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 FAM114A1Q8IWE2 563 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 NAGSQ8N159 534 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 ZNF641Q96N77 438 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 ZPBPQ9BS86 351 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TRIT1Q9H3H1 467 aaKnown RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 APMAPQ9HDC9 416 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TRNAU1APQ9NX07 287 aaKnown RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 MAN1B1Q9UKM7 699 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 SUFUQ9UMX1 484 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TMEM184BQ9Y519 407 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 ST14Q9Y5Y6 855 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 RPS6KL1Q9Y6S9 549 aa11.77□□□□□ -0.53
PDLIM1P1-201ENST00000604187 A8MX80 341 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 RASA4BC9J798 803 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 FOXN3O00409 490 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 RASA4O43374 803 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 DLGAP3O95886 979 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 FUCA1P04066 466 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CEACAM5P06731 702 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 F8A1P23610 371 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TNFRSF8P28908 595 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CDH5P33151 784 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 GPLD1P80108 840 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 GRM3Q14832 879 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 ACOX1Q15067 660 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 C15orf59Q2T9L4 293 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 LIPIQ6XZB0 460 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 GBP6Q6ZN66 633 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 MAMDC2Q7Z304 686 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TMEM135Q86UB9 458 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 ESX1Q8N693 406 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CCDC185Q8N715 623 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PAF1Q8N7H5 531 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 RTL3Q8N8U3 475 aaKnown RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 OR10G6Q8NH81 332 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 RNF31Q96EP0 1072 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 AHCYL2Q96HN2 611 aaKnown RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TUBGCP5Q96RT8 1024 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 CASS4Q9NQ75 786 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 METTL5Q9NRN9 209 aaKnown RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PHPT1Q9NRX4 125 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 PDP2Q9P2J9 529 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 UBA2Q9UBT2 640 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 TLK1Q9UKI8 766 aa11.76□□□□□ -0.53
PDLIM1P1-201ENST00000604187 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms