RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 DTD2Q96FN9 168 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 RNF157Q96PX1 679 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 RBM15Q96T37 977 aaKnown RBP eCLIP18.13■□□□□ 0.49
CCDC12-208ENST00000603885 FGF22Q9HCT0 170 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 PADI4Q9UM07 663 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 PPIL1Q9Y3C6 166 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 PCDHB1Q9Y5F3 818 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 ZNF487B1APH4 448 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 MYCLP1P12525 358 aaPredicted RBP18.12■□□□□ 0.49
CCDC12-208ENST00000603885 CTPS1P17812 591 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 TGM2P21980 687 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 CA4P22748 312 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 ETV3P41162 512 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 DSC2Q02487 901 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 TBX2Q13207 712 aaPredicted RBP18.12■□□□□ 0.49
CCDC12-208ENST00000603885 PERM1Q5SV97 790 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 SARM1Q6SZW1 724 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 HSD11B1LQ7Z5J1 315 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 VSIG1Q86XK7 387 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC12-208ENST00000603885 CCNYQ8ND76 341 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.12■□□□□ 0.49
CCDC12-208ENST00000603885 HNRNPLLQ8WVV9 542 aaKnown RBP18.12■□□□□ 0.49
CCDC12-208ENST00000603885 PIH1D2Q8WWB5 315 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 HDAC11Q96DB2 347 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 PHPT1Q9NRX4 125 aaPredicted RBP18.12■□□□□ 0.49
CCDC12-208ENST00000603885 DTLQ9NZJ0 730 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 SIRPGQ9P1W8 387 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 GULP1Q9UBP9 304 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 INTUQ9ULD6 942 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 GPR34Q9UPC5 381 aa18.12■□□□□ 0.49
CCDC12-208ENST00000603885 A0A087WV48 116 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 FZD6O60353 706 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 BRINP1O60477 761 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 PDHA1P08559 390 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 EPHB1P54762 984 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 SLC10A2Q12908 348 aaPredicted RBP18.11■□□□□ 0.49
CCDC12-208ENST00000603885 COL28A1Q2UY09 1125 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 ODF2Q5BJF6 829 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 KCTD16Q68DU8 428 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 CRTC1Q6UUV9 634 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 TSPAN33Q86UF1 283 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 CCDC13Q8IYE1 715 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 PELI3Q8N2H9 469 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 CBARPQ8N350 705 aaPredicted RBP18.11■□□□□ 0.49
CCDC12-208ENST00000603885 KYQ8NBH2 561 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 WDR48Q8TAF3 677 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 DCBLD2Q96PD2 775 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 LGR4Q9BXB1 951 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 TRIM5Q9C035 493 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 MRPL40Q9NQ50 206 aaKnown RBP18.11■□□□□ 0.49
CCDC12-208ENST00000603885 MOSPD1Q9UJG1 213 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 ADAMTS20P59510 1910 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 RP1P56715 2156 aa18.11■□□□□ 0.49
CCDC12-208ENST00000603885 A0A0J9YYE9 177 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 PRSS38A1L453 326 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 GOLGA6CA6NDK9 693 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 GOLGA6BA6NDN3 693 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 USP12O75317 370 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 TCEA3O75764 348 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 TRBC1P01850 177 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 KRT1P04264 644 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 HLA-DQB2P05538 268 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 GOLGA6DP0CG33 693 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 ACTN2P35609 894 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 SLC1A1P43005 524 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 PPIDQ08752 370 aaKnown RBP18.1■□□□□ 0.49
CCDC12-208ENST00000603885 PTPRRQ15256 657 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 ISXQ2M1V0 245 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 LRRC38Q5VT99 294 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 RAET1GQ6H3X3 334 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 RBM44Q6ZP01 1051 aaKnown RBP18.1■□□□□ 0.49
CCDC12-208ENST00000603885 Q6ZVL8 140 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 TAF8Q7Z7C8 310 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 HEATR4Q86WZ0 1026 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 PLD5Q8N7P1 536 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 LRRN4Q8WUT4 740 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 GRAMD1AQ96CP6 724 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 CCDC3Q9BQI4 270 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 TDRD1Q9BXT4 1180 aaKnown RBP18.1■□□□□ 0.49
CCDC12-208ENST00000603885 MAK16Q9BXY0 300 aaKnown RBP18.1■□□□□ 0.49
CCDC12-208ENST00000603885 TEX101Q9BY14 249 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 CYP4F12Q9HCS2 524 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 GOLGA6AQ9NYA3 693 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 DNPEPQ9ULA0 475 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 HEY1Q9Y5J3 304 aa18.1■□□□□ 0.49
CCDC12-208ENST00000603885 C3orf70A6NLC5 250 aaPredicted RBP18.09■□□□□ 0.49
CCDC12-208ENST00000603885 APOL1O14791 398 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 TLX3O43711 291 aaPredicted RBP18.09■□□□□ 0.49
CCDC12-208ENST00000603885 ZFXP17010 805 aaPredicted RBP18.09■□□□□ 0.49
CCDC12-208ENST00000603885 ZNF30P17039 623 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 TEAD1P28347 426 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 GABREP78334 506 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 DPTQ07507 201 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 TCEAL1Q15170 157 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 LRRC66Q68CR7 880 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 SLC9A4Q6AI14 798 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 RHOT1Q8IXI2 618 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 OR6C4Q8NGE1 309 aa18.09■□□□□ 0.49
CCDC12-208ENST00000603885 SNIP1Q8TAD8 396 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms