RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CABP5Q9NP86 173 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 IL37Q9NZH6 218 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ARMCX3Q9UH62 379 aaPredicted RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF214Q9UL59 606 aaPredicted RBP5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PCDHA12Q9UN75 941 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 MYH15Q9Y2K3 1946 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PASKQ96RG2 1323 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 PCDH11XQ9BZA7 1347 aa5.05□□□□□ -1.6
SPTBN1-206ENST00000602898 CPDO75976 1380 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 LOC100506127A0A0U1RQW1 187 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 A8MX80 341 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CACNG3O60359 315 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 FTLP02792 175 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF865P0CJ78 1059 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CLUP10909 449 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CPB1P15086 417 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ANPEPP15144 967 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 TGM1P22735 817 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MAP4P27816 1152 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ADSSP30520 456 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC7A1P30825 629 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PTPN9P43378 593 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CLK3P49761 638 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 SRP54P61011 504 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PAK1Q13153 545 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF177Q13360 481 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 KCNJ8Q15842 424 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 DPCR1Q3MIW9 517 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF569Q5MCW4 686 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 TMEM63BQ5T3F8 832 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MFSD5Q6N075 450 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PEX26Q7Z412 305 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 NET1Q7Z628 596 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ADAMTSL2Q86TH1 951 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM124AQ86V42 546 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MCEMP1Q8IX19 187 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 IQCKQ8N0W5 287 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ADSSL1Q8N142 457 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 POGLUT1Q8NBL1 392 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 GALNT11Q8NCW6 608 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 OR8K5Q8NH50 307 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ASZ1Q8WWH4 475 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 NELFBQ8WX92 580 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 IP6K1Q92551 441 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 TTC9Q92623 222 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MRPL38Q96DV4 380 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CHMP6Q96FZ7 201 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 DNAJC1Q96KC8 554 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PNMA5Q96PV4 448 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM118BQ9BPY3 351 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 LACRTQ9GZZ8 138 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 LSG1Q9H089 658 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 KCNH6Q9H252 994 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PRDM12Q9H4Q4 367 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 DCLRE1BQ9H816 532 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MARCH7Q9H992 704 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MRPL44Q9H9J2 332 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CENPMQ9NSP4 180 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MRPL39Q9NYK5 338 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CHRNA9Q9UGM1 479 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 NOC2LQ9Y3T9 749 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 GPR45Q9Y5Y3 372 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 HS3ST4Q9Y661 456 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 BTBD17A6NE02 478 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MEIS3P2A8K0S8 358 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 BTBD18B2RXH4 712 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 H3BQV1 296 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 XPO1O14980 1071 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 EFSO43281 561 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM155BO75949 473 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ALX3O95076 343 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CCNB1P14635 433 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ETS1P14921 441 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 HNRNPA2B1P22626 353 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MC5RP33032 325 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 SUMO3P55854 103 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 TYSND1Q2T9J0 566 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM76BQ5HYJ3 339 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PMF1Q6P1K2 205 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CATSPERGQ6ZRH7 1159 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CHSY3Q70JA7 882 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 GPR141Q7Z602 305 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 SYT9Q86SS6 491 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF677Q86XU0 584 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CHERPQ8IWX8 916 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MAML2Q8IZL2 1156 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 FBXL16Q8N461 479 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CSGALNACT2Q8N6G5 542 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ENGASEQ8NFI3 743 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PHOSPHO2Q8TCD6 241 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 UBLCP1Q8WVY7 318 aaPredicted RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 NMD3Q96D46 503 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ZDHHC12Q96GR4 267 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MASTLQ96GX5 879 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CDRT15Q96T59 188 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 C9orf16Q9BUW7 83 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 RAB33BQ9H082 229 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 WNT8AQ9H1J5 351 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 ABHD16BQ9H3Z7 469 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms