RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PISDQ9UG56 409 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 PCSK1NQ9UHG2 260 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 PRSS38A1L453 326 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 HGSO14964 777 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 MYBL1P10243 752 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 CCNB1P14635 433 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 MIPP30301 263 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 KCNC4Q03721 635 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 TRA2AQ13595 282 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 PPP6R3Q5H9R7 873 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 MANEAQ5SRI9 462 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 NYAP1Q6ZVC0 841 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 NLRP8Q86W28 1048 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 CBARPQ8N350 705 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 Q8N9G6 341 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 EXD3Q8N9H8 876 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 COQ10AQ96MF6 247 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 GBP4Q96PP9 640 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 SEMA3CQ99985 751 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 TEX101Q9BY14 249 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 RNF215Q9Y6U7 377 aa17.84■□□□□ 0.45
SHKBP1-227ENST00000602011 RHPN2P1A8MT19 583 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 GOLGA6L22H0YM25 854 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 H3BRJ5 948 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 PYGLP06737 847 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 HGFP14210 728 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 VIPR1P32241 457 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 ARL4AP40617 200 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 NFKB2Q00653 900 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 B4GALNT1Q00973 533 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 SQSTM1Q13501 440 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 ZNF235Q14590 738 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 NR1D2Q14995 579 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 TGIF1Q15583 401 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 CA9Q16790 459 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 FILIP1LQ4L180 1135 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 APTXQ7Z2E3 356 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 ZNF438Q7Z4V0 828 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 SLITRK4Q8IW52 837 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 RAVER1Q8IY67 606 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 ARFGAP1Q8N6T3 406 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 NUS1Q96E22 293 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 SCRN2Q96FV2 425 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 NUDCD1Q96RS6 583 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 KCTD15Q96SI1 283 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 ARHGAP9Q9BRR9 750 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 GPATCH2LQ9NWQ4 482 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 AIPL1Q9NZN9 384 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 CWC15Q9P013 229 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 MOSPD1Q9UJG1 213 aa17.83■□□□□ 0.44
SHKBP1-227ENST00000602011 SPTA1P02549 2419 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 ARHGAP6O43182 974 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 TEX33O43247 280 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 HEXIM1O94992 359 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 WISP1O95388 367 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 FTLP02792 175 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 PRKCGP05129 697 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 CES1P23141 567 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 DPTQ07507 201 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 NFATC3Q12968 1075 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 BIRC2Q13490 618 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 DPYSQ14117 519 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 DPYSL2Q16555 572 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 DTX1Q86Y01 620 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 CCDC112Q8NEF3 446 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 ZDHHC1Q8WTX9 485 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 LGR4Q9BXB1 951 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 FAM117AQ9C073 453 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 CARS2Q9HA77 564 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 MRPL40Q9NQ50 206 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 HAUS2Q9NVX0 235 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 TAS2R14Q9NYV8 317 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 B4GALT6Q9UBX8 382 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 PPIL1Q9Y3C6 166 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 HEMK1Q9Y5R4 338 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 BOD1L1Q8NFC6 3051 aa17.82■□□□□ 0.44
SHKBP1-227ENST00000602011 B4DGG1 531 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 CEACAM5P06731 702 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 GM2AP17900 193 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 CR2P20023 1033 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 SERPINB6P35237 376 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 PRKCIP41743 596 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 CDH6P55285 790 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 SLC10A7Q0GE19 358 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 NCAPHQ15003 741 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 MAP9Q49MG5 647 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 PHF19Q5T6S3 580 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 TMCO3Q6UWJ1 677 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 USP7Q93009 1102 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 DTD2Q96FN9 168 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 CNOT8Q9UFF9 292 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 DNPEPQ9ULA0 475 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 PCDHGA3Q9Y5H0 932 aa17.81■□□□□ 0.44
SHKBP1-227ENST00000602011 SMTNL1A8MU46 457 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 TMCO5BA8MYB1 307 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 B4GAT1O43505 415 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 LRCH4O75427 683 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 CPP00450 1065 aa17.8■□□□□ 0.44
SHKBP1-227ENST00000602011 FGF1P05230 155 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms