RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TUBB8Q3ZCM7 444 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 SDCCAG8Q86SQ7 713 aaPredicted RBP18.01■□□□□ 0.47
VRK3-225ENST00000601912 RALGPS2Q86X27 583 aaPredicted RBP18.01■□□□□ 0.47
VRK3-225ENST00000601912 STK40Q8N2I9 435 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 DEFB123Q8N688 67 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 DNASE1L2Q92874 299 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 RHOJQ9H4E5 214 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 SUDS3Q9H7L9 328 aaPredicted RBP18.01■□□□□ 0.47
VRK3-225ENST00000601912 CATSPERZQ9NTU4 200 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 IL17CQ9P0M4 197 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 XIRP2A4UGR9 3374 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 TSPAN11A1L157 253 aa18■□□□□ 0.47
VRK3-225ENST00000601912 HMX2A2RU54 273 aa18■□□□□ 0.47
VRK3-225ENST00000601912 CD3EAPO15446 510 aaKnown RBP18■□□□□ 0.47
VRK3-225ENST00000601912 AHSGP02765 367 aa18■□□□□ 0.47
VRK3-225ENST00000601912 HNRNPLP14866 589 aaKnown RBP eCLIP18■□□□□ 0.47
VRK3-225ENST00000601912 IL12RB1P42701 662 aa18■□□□□ 0.47
VRK3-225ENST00000601912 LEXMQ3ZCV2 418 aa18■□□□□ 0.47
VRK3-225ENST00000601912 FASTKD1Q53R41 847 aaKnown RBP18■□□□□ 0.47
VRK3-225ENST00000601912 EGFLAMQ63HQ2 1017 aa18■□□□□ 0.47
VRK3-225ENST00000601912 FSTL4Q6MZW2 842 aa18■□□□□ 0.47
VRK3-225ENST00000601912 GALNT7Q86SF2 657 aa18■□□□□ 0.47
VRK3-225ENST00000601912 DSG4Q86SJ6 1040 aa18■□□□□ 0.47
VRK3-225ENST00000601912 ZC3HC1Q86WB0 502 aaKnown RBP18■□□□□ 0.47
VRK3-225ENST00000601912 CILP2Q8IUL8 1156 aa18■□□□□ 0.47
VRK3-225ENST00000601912 TMIEQ8NEW7 156 aa18■□□□□ 0.47
VRK3-225ENST00000601912 GPR150Q8NGU9 434 aa18■□□□□ 0.47
VRK3-225ENST00000601912 SGSM3Q96HU1 749 aa18■□□□□ 0.47
VRK3-225ENST00000601912 VPS39Q96JC1 886 aa18■□□□□ 0.47
VRK3-225ENST00000601912 SERAC1Q96JX3 654 aa18■□□□□ 0.47
VRK3-225ENST00000601912 GUCD1Q96NT3 240 aa18■□□□□ 0.47
VRK3-225ENST00000601912 MCCC1Q96RQ3 725 aaPredicted RBP18■□□□□ 0.47
VRK3-225ENST00000601912 FBRSL1Q9HCM7 1045 aaKnown RBP18■□□□□ 0.47
VRK3-225ENST00000601912 BPIFA1Q9NP55 256 aa18■□□□□ 0.47
VRK3-225ENST00000601912 NKIRAS1Q9NYS0 192 aa18■□□□□ 0.47
VRK3-225ENST00000601912 FAM50BQ9Y247 325 aa18■□□□□ 0.47
VRK3-225ENST00000601912 TICRRQ7Z2Z1 1910 aa18■□□□□ 0.47
VRK3-225ENST00000601912 OR51F1A6NGY5 319 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 NPIPB15A6NHN6 443 aaPredicted RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 FAM47DPA6NHR8 397 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 H7C0S8 307 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 GOLGA8RI6L899 631 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 PRPF4O43172 522 aaKnown RBP eCLIP17.99■□□□□ 0.47
VRK3-225ENST00000601912 CLDN7O95471 211 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 EPHX1P07099 455 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 PYGBP11216 843 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 CYP2A6P11509 494 aaPredicted RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 CD151P48509 253 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 MPP1Q00013 466 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 PFKPQ01813 784 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 CHPFQ8IZ52 775 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 ZNF513Q8N8E2 541 aaPredicted RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 ACMSDQ8TDX5 336 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 SCG3Q8WXD2 468 aaKnown RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 ATXN7L3BQ96GX2 97 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 KLF6Q99612 283 aaPredicted RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 MCMBPQ9BTE3 642 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 PIAS3Q9Y6X2 628 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 UPK3BL1B0FP48 263 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 UPK3BL2E5RIL1 263 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 KPNA3O00505 521 aaPredicted RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 SPAG7O75391 227 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 RFPL1O75677 317 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 BMP1P13497 986 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 OGNP20774 298 aaKnown RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 PMLP29590 882 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 LEPRP48357 1165 aaKnown RBP17.99■□□□□ 0.47
VRK3-225ENST00000601912 POLD2P49005 469 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 SLC18A1P54219 525 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 SLC18A2Q05940 514 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 CDKN3Q16667 212 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 CRTC1Q6UUV9 634 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 TTC7BQ86TV6 843 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 DCLK2Q8N568 766 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 PPP1R16AQ96I34 528 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 CAPS2Q9BXY5 557 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 CACNA2D2Q9NY47 1150 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 FKBPLQ9UIM3 349 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 PPM1HQ9ULR3 514 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 STON1Q9Y6Q2 735 aa17.99■□□□□ 0.47
VRK3-225ENST00000601912 A0A0U1RQS6 177 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 C16orf96A6NNT2 1141 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 A8MX80 341 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 PFDN6O15212 129 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 CHN1P15882 459 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 TIMP2P16035 220 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 GABRB3P28472 473 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 TYK2P29597 1187 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 MC4RP32245 332 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 MDH1P40925 334 aaKnown RBP17.98■□□□□ 0.47
VRK3-225ENST00000601912 SERPINB8P50452 374 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 PPARDQ03181 441 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 ARHGEF7Q14155 803 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 PUS10Q3MIT2 529 aaKnown RBP17.98■□□□□ 0.47
VRK3-225ENST00000601912 LRRC66Q68CR7 880 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 PTCRAQ6ISU1 281 aaPredicted RBP17.98■□□□□ 0.47
VRK3-225ENST00000601912 BANPQ8N9N5 519 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 PIP4K2CQ8TBX8 421 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 MDM1Q8TC05 714 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 KCNV2Q8TDN2 545 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms