RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, human

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-229	ENST00000601373	OSBPL1A	Q9BXW6	950 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	GPR63	Q9BZJ6	419 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	IQCG	Q9H095	443 aa	Known RBP	13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	ZDHHC6	Q9H6R6	413 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	SLC17A6	Q9P2U8	582 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	GGT7	Q9UJ14	662 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	PKP3	Q9Y446	797 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	ZNF711	Q9Y462	761 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	USP15	Q9Y4E8	981 aa	Predicted RBP	13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	KCTD3	Q9Y597	815 aa		13.73	□□□□□ -0.21
IRF3-229	ENST00000601373	DENND4A	Q7Z401	1863 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	TBC1D3B	A6NDS4	549 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CAPN8	A6NHC0	703 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	C19orf67	A6NJJ6	358 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	TTC34	A8MYJ7	566 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373		H7C0S8	307 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	GOLGA8R	I6L899	631 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	PFDN6	O15212	129 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CD3EAP	O15446	510 aa	Known RBP	13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	BNIP3L	O60238	219 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	AHSG	P02765	367 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	MPO	P05164	745 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	TYK2	P29597	1187 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	GK	P32189	559 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	LSP1	P33241	339 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CRHR1	P34998	444 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	HMGCL	P35914	325 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	GRIA2	P42262	883 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CD151	P48509	253 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	ARSD	P51689	593 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	PTPN5	P54829	565 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	TMPRSS15	P98073	1019 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	IL9R	Q01113	521 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CTBP1	Q13363	440 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	MPP2	Q14168	576 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	HHAT	Q5VTY9	493 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	FSTL4	Q6MZW2	842 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	BRAT1	Q6PJG6	821 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	USP45	Q70EL2	814 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CILP2	Q8IUL8	1156 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	ADHFE1	Q8IWW8	467 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	PHTF2	Q8N3S3	785 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	DCLK2	Q8N568	766 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	OTUD6B	Q8N6M0	293 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	OR13C4	Q8NGS5	318 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	SORCS1	Q8WY21	1168 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	SCRN2	Q96FV2	425 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	TCF12	Q99081	682 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	KLF6	Q99612	283 aa	Predicted RBP	13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	GPR22	Q99680	433 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	PRRX2	Q99811	253 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CCDC134	Q9H6E4	229 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	BRD9	Q9H8M2	597 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	ZFYVE1	Q9HBF4	777 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	GTSE1	Q9NYZ3	720 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	IL17C	Q9P0M4	197 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	DCDC2	Q9UHG0	476 aa		13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.72	□□□□□ -0.21
IRF3-229	ENST00000601373	EDDM13	A0A1B0GTR0	161 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	CCDC162P	A2VCL2	907 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	PRRT4	C9JH25	899 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	TPP1	O14773	563 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	AURKA	O14965	403 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	GOT2	P00505	430 aa	Known RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	APOD	P05090	189 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	UGT2B4	P06133	528 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	CTPS1	P17812	591 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	RPA3	P35244	121 aa	Predicted RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	SLC1A2	P43004	574 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	MAGEA12	P43365	314 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	CLCN5	P51795	746 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	NEK3	P51956	506 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	ZP2	Q05996	745 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	KDSR	Q06136	332 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	HTR4	Q13639	388 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	SMAD1	Q15797	465 aa	Known RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	INSC	Q1MX18	579 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	FNDC3B	Q53EP0	1204 aa	Known RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	FASTKD1	Q53R41	847 aa	Known RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	TTC19	Q6DKK2	380 aa	Predicted RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	TPRG1	Q6ZUI0	275 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	LCA5	Q86VQ0	697 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	DENND6A	Q8IWF6	608 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	CHST14	Q8NCH0	376 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	TCP10L	Q8TDR4	215 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	CSGALNACT1	Q8TDX6	532 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	NXPE3	Q969Y0	559 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	VOPP1	Q96AW1	172 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	CATSPERZ	Q9NTU4	200 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	DKK3	Q9UBP4	350 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	SUN2	Q9UH99	717 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	IL36A	Q9UHA7	158 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	GRID1	Q9ULK0	1009 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	VPS9D1	Q9Y2B5	631 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	MTO1	Q9Y2Z2	717 aa	Known RBP	13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	NUMBL	Q9Y6R0	609 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	WASF2	Q9Y6W5	498 aa		13.71	□□□□□ -0.21
IRF3-229	ENST00000601373	TSPAN11	A1L157	253 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms