RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LYSMD1Q96S90 227 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 PAIP2Q9BPZ3 127 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 RPP25Q9BUL9 199 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 YY1AP1Q9H869 796 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 CATSPERZQ9NTU4 200 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 IL17CQ9P0M4 197 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 DCDC2Q9UHG0 476 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 PLLPQ9Y342 182 aa17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 USP15Q9Y4E8 981 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-224ENST00000600718 ANKRD36A6QL64 1941 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 OR51F1A6NGY5 319 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 H7C0S8 307 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 S1PR4O95977 384 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 UGT2B4P06133 528 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 F7P08709 466 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 OGNP20774 298 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 ABCG1P45844 678 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 PDE1CQ14123 709 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 ICE2Q659A1 982 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 FOXR1Q6PIV2 292 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 LVRNQ6Q4G3 990 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 LYSMD3Q7Z3D4 306 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 ZSWIM9Q86XI8 627 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 TTC8Q8TAM2 541 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 GDAP1Q8TB36 358 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 UCMAQ8WVF2 138 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 SCRN2Q96FV2 425 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 OSBPL1AQ9BXW6 950 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 ZFYVE1Q9HBF4 777 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 FBXO6Q9NRD1 293 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 POLR3BQ9NW08 1133 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 MARCH4Q9P2E8 410 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 SLC17A7Q9P2U7 560 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 SLC39A10Q9ULF5 831 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 GRID1Q9ULK0 1009 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 COLQQ9Y215 455 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 TBC1D3BA6NDS4 549 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 ANHXE9PGG2 379 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 SLC4A1P02730 911 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 CLCN5P51795 746 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 USP10Q14694 798 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 CDKN3Q16667 212 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 INSCQ1MX18 579 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 FASTKD1Q53R41 847 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 BRAT1Q6PJG6 821 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 CNSTQ6PJW8 725 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 USP45Q70EL2 814 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 MICALL1Q8N3F8 863 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 HCAR2Q8TDS4 363 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 MAGEB18Q96M61 343 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 KLHL32Q96NJ5 620 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 GAS2L1Q99501 681 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 IL36AQ9UHA7 158 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 WASF2Q9Y6W5 498 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 PDE4DIPQ5VU43 2346 aa17.66■□□□□ 0.42
SHKBP1-224ENST00000600718 MYO9BQ13459 2157 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 GLRA3O75311 464 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 FNDC3BQ53EP0 1204 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 ARSIQ5FYB1 569 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 CDHR3Q6ZTQ4 885 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 TPRG1Q6ZUI0 275 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 NUDT18Q6ZVK8 323 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 TCF12Q99081 682 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 FAM107BQ9H098 131 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 NUMBLQ9Y6R0 609 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 DOCK8Q8NF50 2099 aa17.65■□□□□ 0.42
SHKBP1-224ENST00000600718 C1orf232A0A0U1RR37 186 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM95CA0A1B0GW59 222 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 ARNTLO00327 626 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 GSTA1P08263 222 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 DHRS4L1P0CG22 281 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 SP100P23497 879 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 GRIA2P42262 883 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 ETV4P43268 484 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 SEC24CP53992 1094 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 POU4F1Q01851 419 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 HTR4Q13639 388 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 MICALCLQ6ZW33 695 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 CMC1Q7Z7K0 106 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 ACVR1CQ8NER5 493 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 GRIN3AQ8TCU5 1115 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 EID2BQ96D98 161 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 CHMP6Q96FZ7 201 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM111AQ96PZ2 611 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 MCCC1Q96RQ3 725 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 VPS11Q9H270 941 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 BRD9Q9H8M2 597 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 BPIFA1Q9NP55 256 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 INTS10Q9NVR2 710 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 FKBPLQ9UIM3 349 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 CORO1CQ9ULV4 474 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 DENND4AQ7Z401 1863 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 A0A096LPK6 155 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 EDDM13A0A1B0GTR0 161 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 LEFTY1O75610 366 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 KAT7O95251 611 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 CRABP2P29373 138 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 PMLP29590 882 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 CSRP3P50461 194 aa17.64■□□□□ 0.41
SHKBP1-224ENST00000600718 TYSND1Q2T9J0 566 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms